Archivio Istituzionale della RicercaDE MARTINO, ANDREA
DE MARTINO, ANDREA
Dipartimento Scienza Applicata e Tecnologia
091061
Cross-feeding percolation phase transitions of intercellular metabolic networks
2025 Latoski, Luís C. F.; De Martino, Andrea; De Martino, Daniele
Metabolic coordination and phase transitions in spatially distributed multi-cellular systems
2025 Narayanankutty, Krishnadev; Pereiro-Morejon, José Antonio; Ferrero-Fernández, Arián; Onesto, Valentina; Forciniti, Stefania; Del Mercato, Loretta L.; Mulet, Roberto; De Martino, Andrea; Tourigny, David S.; De Martino, Daniele
Out-of-Equilibrium ceRNA Crosstalk
2025 Ferro, Elsi; Szischik, Candela L.; Cunial, Marta; Ventura, Alejandra C.; De Martino, Andrea; Bosia, Carla
Effective noisy dynamics within the phenotypic space of a growth-rate maximizing population
2024 Batista-Tomás, A. R.; De Martino, Andrea; Mulet, Roberto
Metabolic diversity in cell populations: probability densities over the flux polytope
2023 De Martino, Andrea; Rivas Astroza, Marcelo
Optimal metabolic strategies for microbial growth in stationary random environments
2023 Muntoni, ANNA PAOLA; DE MARTINO, Andrea
Probing Single-Cell Fermentation Fluxes and Exchange Networks via pH-Sensing Hybrid Nanofibers
2023 Onesto, Valentina; Forciniti, Stefania; Alemanno, Francesco; Narayanankutty, Krishnadev; Chandra, Anil; Prasad, Saumya; Azzariti, Amalia; Gigli, Giuseppe; Barra, Adriano; De Martino, Andrea; De Martino, Daniele; Del Mercato, Loretta L
Relationship between fitness and heterogeneity in exponentially growing microbial populations
2022 Muntoni, Anna Paola; Braunstein, Alfredo; Pagnani, Andrea; De Martino, Daniele; De Martino, Andrea
Statistical-physics approaches to RNA molecules, families and networks
2022 Cocco, Simona; DE MARTINO, Andrea; Pagnani, Andrea; Weigt, Martin
Initial cell density encodes proliferative potential in cancer cell populations
2021 Enrico Bena, Chiara; Del Giudice, Marco; Grob, Alice; Gueudré, Thomas; Miotto, Mattia; Gialama, Dimitra; Osella, Matteo; Turco, Emilia; Ceroni, Francesca; De Martino, Andrea; Bosia, Carla
Path-integral solution of MacArthur’s resource-competition model for large ecosystems with random species-resources couplings
2021 Batista-Tomas, A. R.; De Martino, A.; Mulet, R.
MicroRNAs organize intrinsic variation into stem cell states
2020 Chakraborty, M.; Hu, S.; Visness, E.; Giudice, M. D.; de Martino, A.; Bosia, C.; Sharp, P. A.; Garg, S.
A yield-cost tradeoff governs Escherichia coli’s decision between fermentation and respiration in carbon-limited growth
2019 Mori, M.; Marinari, E.; De Martino, A.
Competing endogenous RNA crosstalk at system level
2019 Miotto, M.; Marinari, E.; De Martino, A.
Exploration-exploitation tradeoffs dictate the optimal distributions of phenotypes for populations subject to fitness fluctuations
2019 De Martino, Andrea; Gueudré, Thomas; Miotto, Mattia
Kinetic modelling of competition and depletion of shared miRNAs by competing endogenous RNAs
2019 Martirosyan, Araks; Del Giudice, Marco; ENRICO BENA, Chiara; Pagnani, Andrea; Bosia, Carla; De Martino, Andrea
The Essential Role of Thermodynamics in Metabolic Network Modeling: Physical Insights and Computational Challenges
2019 De Martino, A.; De Martino, D.; Marinari, E.
An introduction to the maximum entropy approach and its application to inference problems in biology
2018 De Martino, A.; De Martino, D.
Statistics of optimal information flow in ensembles of regulatory motifs
2018 Crisanti, Andrea; De Martino, Andrea; Fiorentino, Jonathan
CeRNA crosstalk stabilizes protein expression and affects the correlation pattern of interacting proteins
2017 Martirosyan, Araks; De Martino, Andrea; Pagnani, Andrea; Marinari, Enzo
| Citazione | Data di pubblicazione | Autori | File |
|---|---|---|---|
| Cross-feeding percolation phase transitions of intercellular metabolic networks / Latoski, Luís C. F.; De Martino, Andrea; De Martino, Daniele. - In: SCIENCE ADVANCES. - ISSN 2375-2548. - 11:36(2025). [10.1126/sciadv.adv8216] | 1-gen-2025 | De Martino, Andrea + | 77-Crossfeeding percolation phase transitions.pdf |
| Metabolic coordination and phase transitions in spatially distributed multi-cellular systems / Narayanankutty, Krishnadev; Pereiro-Morejon, José Antonio; Ferrero-Fernández, Arián; Onesto, Valentina; Forciniti, Stefania; Del Mercato, Loretta L.; Mulet, Roberto; De Martino, Andrea; Tourigny, David S.; De Martino, Daniele. - In: COMMUNICATIONS PHYSICS. - ISSN 2399-3650. - 8:1(2025). [10.1038/s42005-025-02133-x] | 1-gen-2025 | De Martino, Andrea + | 76-Metabolic coordination and phase transitions.pdf |
| Out-of-Equilibrium ceRNA Crosstalk / Ferro, Elsi; Szischik, Candela L.; Cunial, Marta; Ventura, Alejandra C.; De Martino, Andrea; Bosia, Carla (METHODS IN MOLECULAR BIOLOGY). - In: Computational Biology of Non-Coding RNA : Methods and Protocols / Xin Lai, Shailendra Gupta, Julio Vera Gonzalez. - [s.l] : Humana Press - Springer, 2025. - ISBN 9781071642894. - pp. 167-193 [10.1007/978-1-0716-4290-0_8] | 1-gen-2025 | Ferro, ElsiCunial, MartaDe Martino, AndreaBosia, Carla + | 2024_MethodsInMolecularBiology_Bosia-Capitolo_8.pdf |
| Effective noisy dynamics within the phenotypic space of a growth-rate maximizing population / Batista-Tomás, A. R.; De Martino, Andrea; Mulet, Roberto. - In: PHYSICA. A. - ISSN 0378-4371. - 634:(2024), pp. 1-9. [10.1016/j.physa.2023.129451] | 1-gen-2024 | De Martino, Andrea + | 73-Effective noisy dynamics.pdf |
| Metabolic diversity in cell populations: probability densities over the flux polytope / De Martino, Andrea; Rivas Astroza, Marcelo. - Economic Principles in Cell Biology:(2023), pp. 1-22. | 1-gen-2023 | De Martino, Andrea + | chapter-VAR.pdf; Economic Principles in Cell Biology.pdf |
| Optimal metabolic strategies for microbial growth in stationary random environments / Muntoni, ANNA PAOLA; DE MARTINO, Andrea. - In: PHYSICAL BIOLOGY. - ISSN 1478-3967. - 20:3(2023), p. 036001. [10.1088/1478-3975/acc1bc] | 1-gen-2023 | Anna Paola MuntoniAndrea De Martino | 71-Optimal metabolic strategies for microbial growth.pdf |
| Probing Single-Cell Fermentation Fluxes and Exchange Networks via pH-Sensing Hybrid Nanofibers / Onesto, Valentina; Forciniti, Stefania; Alemanno, Francesco; Narayanankutty, Krishnadev; Chandra, Anil; Prasad, Saumya; Azzariti, Amalia; Gigli, Giuseppe; Barra, Adriano; De Martino, Andrea; De Martino, Daniele; Del Mercato, Loretta L. - In: ACS NANO. - ISSN 1936-0851. - 17:4(2023), pp. 3313-3323. [10.1021/acsnano.2c06114] | 1-gen-2023 | De Martino, Andrea + | acsnano.2c06114.pdf |
| Relationship between fitness and heterogeneity in exponentially growing microbial populations / Muntoni, Anna Paola; Braunstein, Alfredo; Pagnani, Andrea; De Martino, Daniele; De Martino, Andrea. - In: BIOPHYSICAL JOURNAL. - ISSN 0006-3495. - ELETTRONICO. - 121:10(2022), pp. 1919-1930. [10.1016/j.bpj.2022.04.012] | 1-gen-2022 | Muntoni, Anna PaolaBraunstein, AlfredoPagnani, AndreaDe Martino, Andrea + | mmc2.pdf |
| Statistical-physics approaches to RNA molecules, families and networks / Cocco, Simona; DE MARTINO, Andrea; Pagnani, Andrea; Weigt, Martin. - (2022). | 1-gen-2022 | Andrea De MartinoAndrea Pagnani + | - |
| Initial cell density encodes proliferative potential in cancer cell populations / Enrico Bena, Chiara; Del Giudice, Marco; Grob, Alice; Gueudré, Thomas; Miotto, Mattia; Gialama, Dimitra; Osella, Matteo; Turco, Emilia; Ceroni, Francesca; De Martino, Andrea; Bosia, Carla. - In: SCIENTIFIC REPORTS. - ISSN 2045-2322. - ELETTRONICO. - 11:1(2021), p. 6101. [10.1038/s41598-021-85406-z] | 1-gen-2021 | De Martino, AndreaBosia, Carla + | 2021_SciRep_unito.pdf |
| Path-integral solution of MacArthur’s resource-competition model for large ecosystems with random species-resources couplings / Batista-Tomas, A. R.; De Martino, A.; Mulet, R.. - In: CHAOS. - ISSN 1054-1500. - 31:10(2021), p. 103113. [10.1063/5.0046972] | 1-gen-2021 | De Martino A. + | 5.0046972.pdf |
| MicroRNAs organize intrinsic variation into stem cell states / Chakraborty, M.; Hu, S.; Visness, E.; Giudice, M. D.; de Martino, A.; Bosia, C.; Sharp, P. A.; Garg, S.. - In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. - ISSN 0027-8424. - ELETTRONICO. - 117:12(2020), pp. 6942-6950. [10.1073/pnas.1920695117] | 1-gen-2020 | de Martino A.Bosia C. + | 6942.full.pdf |
| A yield-cost tradeoff governs Escherichia coli’s decision between fermentation and respiration in carbon-limited growth / Mori, M.; Marinari, E.; De Martino, A.. - In: NPJ SYSTEMS BIOLOGY AND APPLICATIONS. - ISSN 2056-7189. - 5:1(2019), p. 16. [10.1038/s41540-019-0093-4] | 1-gen-2019 | De Martino A. + | s41540-019-0093-4.pdf |
| Competing endogenous RNA crosstalk at system level / Miotto, M.; Marinari, E.; De Martino, A.. - In: PLOS COMPUTATIONAL BIOLOGY. - ISSN 1553-734X. - 15:11(2019), p. e1007474. [10.1371/journal.pcbi.1007474] | 1-gen-2019 | De Martino A. + | document.pdf |
| Exploration-exploitation tradeoffs dictate the optimal distributions of phenotypes for populations subject to fitness fluctuations / De Martino, Andrea; Gueudré, Thomas; Miotto, Mattia. - In: PHYSICAL REVIEW. E. - ISSN 2470-0045. - 99:1(2019), p. 012417. [10.1103/physreve.99.012417] | 1-gen-2019 | De Martino, Andrea + | PhysRevE.99.012417.pdf |
| Kinetic modelling of competition and depletion of shared miRNAs by competing endogenous RNAs / Martirosyan, Araks; Del Giudice, Marco; ENRICO BENA, Chiara; Pagnani, Andrea; Bosia, Carla; De Martino, Andrea (METHODS IN MOLECULAR BIOLOGY). - In: Methods in Molecular BiologySTAMPA. - [s.l] : Humana Press Inc., 2019. - ISBN 978-1-4939-8981-2. - pp. 367-409 [10.1007/978-1-4939-8982-9_15] | 1-gen-2019 | Del Giudice, MarcoENRICO BENA, CHIARAPagnani, AndreaBosia, CarlaDe Martino, Andrea + | Chapter15.pdf |
| The Essential Role of Thermodynamics in Metabolic Network Modeling: Physical Insights and Computational Challenges / De Martino, A.; De Martino, D.; Marinari, E. - In: Chemical Kinetics-Beyond the Textbook / Lindenberg K., Metzler R.. - [s.l] : World Scientific, 2019. - ISBN 978-1-78634-700-8. - pp. 455-471 [10.1142/9781786347015_0018] | 1-gen-2019 | De Martino, A. + | - |
| An introduction to the maximum entropy approach and its application to inference problems in biology / De Martino, A.; De Martino, D.. - In: HELIYON. - ISSN 2405-8440. - 4:4(2018), p. e00596. [10.1016/j.heliyon.2018.e00596] | 1-gen-2018 | De Martino A. + | 1-s2.0-S2405844018301695-main.pdf |
| Statistics of optimal information flow in ensembles of regulatory motifs / Crisanti, Andrea; De Martino, Andrea; Fiorentino, Jonathan. - In: PHYSICAL REVIEW. E. - ISSN 2470-0045. - 97:2-1(2018), p. 022407. [10.1103/physreve.97.022407] | 1-gen-2018 | De Martino, Andrea + | PhysRevE.97.022407.pdf |
| CeRNA crosstalk stabilizes protein expression and affects the correlation pattern of interacting proteins / Martirosyan, Araks; De Martino, Andrea; Pagnani, Andrea; Marinari, Enzo. - In: SCIENTIFIC REPORTS. - ISSN 2045-2322. - 7:(2017), p. 43673. [10.1038/srep43673] | 1-gen-2017 | De Martino, AndreaPAGNANI, ANDREA + | srep43673.pdf |