MUNTONI, ANNA PAOLA
MUNTONI, ANNA PAOLA
Dipartimento Scienza Applicata e Tecnologia
029568
Effectiveness of probabilistic contact tracing in epidemic containment: The role of superspreaders and transmission path reconstruction
2024 Muntoni, Anna Paola; Mazza, Fabio; Braunstein, Alfredo; Catania, Giovanni; Dall'Asta, Luca
DCAlign v1.0: Aligning biological sequences using co-evolution models and informed priors
2023 Muntoni, Anna Paola; Pagnani, Andrea
Inference in conditioned dynamics through causality restoration
2023 Braunstein, Alfredo; Catania, Giovanni; Dall'Asta, Luca; Mariani, Matteo; Muntoni, Anna Paola
Optimal metabolic strategies for microbial growth in stationary random environments
2023 Muntoni, ANNA PAOLA; DE MARTINO, Andrea
Relationship between fitness and heterogeneity in exponentially growing microbial populations
2022 Muntoni, Anna Paola; Braunstein, Alfredo; Pagnani, Andrea; De Martino, Daniele; De Martino, Andrea
A density consistency approach to the inverse Ising problem
2021 Braunstein, A.; Catania, G.; Dall'Asta, L.; Muntoni, A. P.
adabmDCA: adaptive Boltzmann machine learning for biological sequences
2021 Muntoni, Anna Paola; Pagnani, Andrea; Weigt, Martin; Zamponi, Francesco
Epidemic mitigation by statistical inference from contact tracing data
2021 Baker, A.; Biazzo, I.; Braunstein, A.; Catania, G.; Dall'Asta, L.; Ingrosso, A.; Krzakala, F.; Mazza, F.; Mezard, M.; Muntoni, A. P.; Refinetti, M.; Mannelli, S. S.; Zdeborova, L.
Sparse generative modeling via parameter reduction of Boltzmann machines: Application to protein-sequence families
2021 Barrat-Charlaix, Pierre; Muntoni, Anna Paola; Shimagaki, Kai; Weigt, Martin; Zamponi, Francesco
Aligning biological sequences by exploiting residue conservation and coevolution
2020 Muntoni, Anna Paola; Pagnani, Andrea; Weigt, Martin; Zamponi, Francesco
Compressed sensing reconstruction using Expectation Propagation
2020 Braunstein, Alfredo; Muntoni, Anna Paola; Pagnani, Andrea; Pieropan, Mirko
Network reconstruction from infection cascades
2019 Braunstein, A.; Ingrosso, A.; Muntoni, A. P.
Nonconvex image reconstruction via expectation propagation
2019 Muntoni, ANNA PAOLA; Díaz Hernández Rojas, Rafael; Braunstein, Alfredo; Pagnani, Andrea; Pérez Castillo, Isaac
The cavity approach for Steiner trees packing problems
2018 Braunstein, Alfredo; Muntoni, Anna Paola
An analytic approximation of the feasible space of metabolic networks
2017 Braunstein, Alfredo; Muntoni, ANNA PAOLA; Pagnani, Andrea
Practical optimization of Steiner trees via the cavity method
2016 Braunstein, Alfredo; Muntoni, ANNA PAOLA
Citazione | Data di pubblicazione | Autori | File |
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Effectiveness of probabilistic contact tracing in epidemic containment: The role of superspreaders and transmission path reconstruction / Muntoni, Anna Paola; Mazza, Fabio; Braunstein, Alfredo; Catania, Giovanni; Dall'Asta, Luca. - In: PNAS NEXUS. - ISSN 2752-6542. - 3:9(2024). [10.1093/pnasnexus/pgae377] | 1-gen-2024 | Muntoni, Anna PaolaMazza, FabioBraunstein, AlfredoCatania, GiovanniDall'Asta, Luca | pgae377.pdf |
DCAlign v1.0: Aligning biological sequences using co-evolution models and informed priors / Muntoni, Anna Paola; Pagnani, Andrea. - In: BIOINFORMATICS. - ISSN 1367-4811. - 39:9(2023). [10.1093/bioinformatics/btad537] | 1-gen-2023 | Muntoni, Anna PaolaPagnani, Andrea | btad537.pdf |
Inference in conditioned dynamics through causality restoration / Braunstein, Alfredo; Catania, Giovanni; Dall'Asta, Luca; Mariani, Matteo; Muntoni, Anna Paola. - In: SCIENTIFIC REPORTS. - ISSN 2045-2322. - 13:(2023). [10.1038/s41598-023-33770-3] | 1-gen-2023 | Braunstein, AlfredoCatania, GiovanniDall'Asta, LucaMariani, MatteoMuntoni, Anna Paola | s41598-023-33770-3.pdf |
Optimal metabolic strategies for microbial growth in stationary random environments / Muntoni, ANNA PAOLA; DE MARTINO, Andrea. - In: PHYSICAL BIOLOGY. - ISSN 1478-3967. - 20:3(2023), p. 036001. [10.1088/1478-3975/acc1bc] | 1-gen-2023 | Anna Paola MuntoniAndrea De Martino | 71-Optimal metabolic strategies for microbial growth.pdf |
Relationship between fitness and heterogeneity in exponentially growing microbial populations / Muntoni, Anna Paola; Braunstein, Alfredo; Pagnani, Andrea; De Martino, Daniele; De Martino, Andrea. - In: BIOPHYSICAL JOURNAL. - ISSN 0006-3495. - ELETTRONICO. - 121:10(2022), pp. 1919-1930. [10.1016/j.bpj.2022.04.012] | 1-gen-2022 | Muntoni, Anna PaolaBraunstein, AlfredoPagnani, AndreaDe Martino, Andrea + | mmc2.pdf |
A density consistency approach to the inverse Ising problem / Braunstein, A.; Catania, G.; Dall'Asta, L.; Muntoni, A. P.. - In: JOURNAL OF STATISTICAL MECHANICS: THEORY AND EXPERIMENT. - ISSN 1742-5468. - ELETTRONICO. - 2021:3(2021), p. 033416. [10.1088/1742-5468/abed43] | 1-gen-2021 | Braunstein A.Catania G.Dall'Asta L.Muntoni A. P. | Braunstein_2021_J._Stat._Mech._2021_033416.pdf |
adabmDCA: adaptive Boltzmann machine learning for biological sequences / Muntoni, Anna Paola; Pagnani, Andrea; Weigt, Martin; Zamponi, Francesco. - In: BMC BIOINFORMATICS. - ISSN 1471-2105. - 22:1(2021), pp. 1-19. [10.1186/s12859-021-04441-9] | 1-gen-2021 | Muntoni, Anna PaolaPagnani, AndreaZamponi, Francesco + | s12859-021-04441-9.pdf |
Epidemic mitigation by statistical inference from contact tracing data / Baker, A.; Biazzo, I.; Braunstein, A.; Catania, G.; Dall'Asta, L.; Ingrosso, A.; Krzakala, F.; Mazza, F.; Mezard, M.; Muntoni, A. P.; Refinetti, M.; Mannelli, S. S.; Zdeborova, L.. - In: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. - ISSN 0027-8424. - ELETTRONICO. - 118:32(2021), p. e2106548118. [10.1073/pnas.2106548118] | 1-gen-2021 | Biazzo I.Braunstein A.Catania G.Dall'Asta L.Ingrosso A.Mazza F.Muntoni A. P. + | e2106548118.full.pdf |
Sparse generative modeling via parameter reduction of Boltzmann machines: Application to protein-sequence families / Barrat-Charlaix, Pierre; Muntoni, Anna Paola; Shimagaki, Kai; Weigt, Martin; Zamponi, Francesco. - In: PHYSICAL REVIEW. E. - ISSN 2470-0045. - 104:2(2021), pp. 1-20. [10.1103/physreve.104.024407] | 1-gen-2021 | Barrat-Charlaix, PierreMuntoni, Anna PaolaZamponi, Francesco + | PhysRevE.104.024407.pdf; 2011.11259v3.pdf |
Aligning biological sequences by exploiting residue conservation and coevolution / Muntoni, Anna Paola; Pagnani, Andrea; Weigt, Martin; Zamponi, Francesco. - In: PHYSICAL REVIEW. E. - ISSN 2470-0045. - 102:6(2020), p. 062409. [10.1103/PhysRevE.102.062409] | 1-gen-2020 | Muntoni, Anna PaolaPagnani, Andrea + | PhysRevE.102.062409.pdf |
Compressed sensing reconstruction using Expectation Propagation / Braunstein, Alfredo; Muntoni, Anna Paola; Pagnani, Andrea; Pieropan, Mirko. - In: JOURNAL OF PHYSICS. A, MATHEMATICAL AND THEORETICAL. - ISSN 1751-8113. - 53:18(2020), p. 184001. [10.1088/1751-8121/ab3065] | 1-gen-2020 | Braunstein, AlfredoMuntoni, Anna PaolaPagnani, AndreaPieropan, Mirko | Braunstein+et+al_2019_J._Phys._A:_Math._Theor._10.1088_1751-8121_ab3065.pdf; Braunstein_2020_J._Phys._A__Math._Theor._53_184001.pdf |
Network reconstruction from infection cascades / Braunstein, A.; Ingrosso, A.; Muntoni, A. P.. - In: JOURNAL OF THE ROYAL SOCIETY INTERFACE. - ISSN 1742-5689. - 16:151(2019), p. 20180844. [10.1098/rsif.2018.0844] | 1-gen-2019 | Braunstein A.Ingrosso A.Muntoni A. P. | epidemics_royal_soc.pdf; 1609.00432.pdf |
Nonconvex image reconstruction via expectation propagation / Muntoni, ANNA PAOLA; Díaz Hernández Rojas, Rafael; Braunstein, Alfredo; Pagnani, Andrea; Pérez Castillo, Isaac. - In: PHYSICAL REVIEW. E. - ISSN 2470-0053. - ELETTRONICO. - 100:(2019), p. 032134. [10.1103/PhysRevE.100.032134] | 1-gen-2019 | Anna Paola MuntoniAlfredo BraunsteinAndrea Pagnani + | PhysRevE.100.032134.pdf |
The cavity approach for Steiner trees packing problems / Braunstein, Alfredo; Muntoni, Anna Paola. - In: JOURNAL OF STATISTICAL MECHANICS: THEORY AND EXPERIMENT. - ISSN 1742-5468. - ELETTRONICO. - 2018:12(2018), p. 123401. [10.1088/1742-5468/aaeb3f] | 1-gen-2018 | Braunstein, AlfredoMuntoni, Anna Paola | - |
An analytic approximation of the feasible space of metabolic networks / Braunstein, Alfredo; Muntoni, ANNA PAOLA; Pagnani, Andrea. - In: NATURE COMMUNICATIONS. - ISSN 2041-1723. - ELETTRONICO. - 8:(2017), p. 14915. [10.1038/ncomms14915] | 1-gen-2017 | BRAUNSTEIN, ALFREDOMUNTONI, ANNA PAOLAPAGNANI, ANDREA | ncomms14915.pdf |
Practical optimization of Steiner trees via the cavity method / Braunstein, Alfredo; Muntoni, ANNA PAOLA. - In: JOURNAL OF STATISTICAL MECHANICS: THEORY AND EXPERIMENT. - ISSN 1742-5468. - 2016:7(2016), p. 073302. [10.1088/1742-5468/2016/07/073302] | 1-gen-2016 | BRAUNSTEIN, ALFREDOMUNTONI, ANNA PAOLA | - |