FICARRA, ELISA

FICARRA, ELISA  

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A Molecular Dynamics study of a miRNA:mRNA interaction / Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa; Deriu, MARCO AGOSTINO; Macii, Enrico. - In: JOURNAL OF MOLECULAR MODELING. - ISSN 1610-2940. - STAMPA. - 17:11(2011), pp. 2895-2906. [10.1007/s00894-011-0991-x] 1-gen-2011 PACIELLO, GIULIAACQUAVIVA, ANDREAFICARRA, ELISADERIU, MARCO AGOSTINOMACII, Enrico -
A New Latent Semantic Analysis Based Methodology For Knowledge Extraction From Biomedical Literature And Biological Pathways Databases / Abate, Francesco; Ficarra, Elisa; Acquaviva, Andrea; Macii, Enrico. - STAMPA. - (2011), pp. 66-74. ((Intervento presentato al convegno BIOINFORMATICS, International Conference on Bionformatics Models, Methods and Algorithms tenutosi a Rome, Italy nel 26-29 January 2011. 1-gen-2011 ABATE, FRANCESCOFICARRA, ELISAACQUAVIVA, ANDREAMACII, Enrico -
A NOVEL ANALYSIS FLOW FOR FUSED TRANSCRIPTS DISCOVERY FROM PAIRED-END RNA-SEQ DATA / Abate, Francesco; Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa; Ferrarini, A.; Delledonne, M.; Macii, Enrico. - STAMPA. - (2012), pp. 331-334. ((Intervento presentato al convegno International Conference on Bioinformatics Models, Methods and Algorithms (BIOINFORMATICS 2012) tenutosi a Vilamoura, Algarve (Portugal) nel 1-4 February 2012 [10.5220/0003789003310334]. 1-gen-2012 ABATE, FRANCESCOPACIELLO, GIULIAACQUAVIVA, ANDREAFICARRA, ELISAMACII, Enrico + -
A Novel Gaussian Extrapolation Approach for 2D Gel Electrophoresis Saturated Protein Spots / Natale, Massimo; Caiazzo, A.; Bucci, E. M.; Ficarra, Elisa. - In: GENOMICS, PROTEOMICS & BIOINFORMATICS. - ISSN 1672-0229. - (2012), pp. 336-344. [10.1016/j.gpb.2012.06.005] 1-gen-2012 NATALE, MASSIMOFICARRA, ELISA + 2012 - A novel gaussian extrapolation approach for 2D gel electrophoresis saturated protein spots - porto.pdf
A novel Gaussian fitting approach for 2D gel electrophoresis saturated protein spots / Natale, Massimo; Caiazzo, A.; Bucci, E. M.; Ficarra, Elisa. - (2012), pp. 335-338. ((Intervento presentato al convegno Proceedings of the International Conference on Bioinformatics Models, Methods andAlgorithms, tenutosi a Vilamoura, Algarve, Portugal nel 1-4 Feb. 2012 [10.5220/0003789803350338]. 1-gen-2012 NATALE, MASSIMOFICARRA, ELISA + BIOINFORMATICS_2012_84_porto.pdf
A Novel Pipeline for Identification and Prioritization of Gene Fusions in Patient-derived Xenografts of Metastatic Colorectal Cancer / Paciello, Giulia; Acquaviva, Andrea; Consalvo, Petti; Claudio, Isella; Enzo, Medico; Ficarra, Elisa. - (2014), pp. 142-148. ((Intervento presentato al convegno BIOSTEC 2014 tenutosi a Eseo, Angers, Loire Valley, France nel 3-6 March 2014 [10.5220/0004799401420148]. 1-gen-2014 PACIELLO, GIULIAACQUAVIVA, ANDREAFICARRA, ELISA + -
A novel pipeline for V(D)J junction identification using RNA-Seq paired-end reads / Paciello, Giulia; Ficarra, Elisa; Alberto, Zamò; Chiara, Pighi; Carmelo, Foti; Abate, Francesco; Macii, Enrico; Acquaviva, Andrea. - STAMPA. - (2013). ((Intervento presentato al convegno Bioinformatics 2013, International Conference on Bioinformatics Models, Methods and Algorithms tenutosi a Barcelona, Spain nel 11-14 February 2013. 1-gen-2013 PACIELLO, GIULIAFICARRA, ELISAABATE, FRANCESCOMACII, EnricoACQUAVIVA, ANDREA + Biostec_camera_ready.pdf
A Robust Algorithm for Automated Analysis of DNA Molecules in AFM Images / Ficarra, Elisa; Benini, L; Macii, Enrico; Zuccheri, G.. - (2004), pp. 213-218. ((Intervento presentato al convegno IASTED Biomedical Engineering (BioMED 2004) tenutosi a Innsbruck, AUSTRIA nel February 2004. 1-gen-2004 FICARRA, ELISAMACII, Enrico + -
Acceleration of Coarse Grain Molecular Dynamics on GPU Architectures / Shkurti, Ardita; Mario, Orsi; Macii, Enrico; Ficarra, Elisa; Acquaviva, Andrea. - In: JOURNAL OF COMPUTATIONAL CHEMISTRY. - ISSN 0192-8651. - STAMPA. - 34:10(2013), pp. 803-818. [10.1002/jcc.23183] 1-gen-2013 SHKURTI, ARDITAMACII, EnricoFICARRA, ELISAACQUAVIVA, ANDREA + jccSHKURTI.pdfShkurti_Journal_of_Computational_Chemistry.pdf
Achieving the Way for Automated Segmentation of Nuclei in Cancer Tissue Images through Morphology-Based Approach: a Quantitative Evaluation / DI CATALDO, Santa; Ficarra, Elisa; Acquaviva, Andrea; Macii, E.. - In: COMPUTERIZED MEDICAL IMAGING AND GRAPHICS. - ISSN 0895-6111. - 34:(2010), pp. 453-461. [10.1016/j.compmedimag.2009.12.008] 1-gen-2010 DI CATALDO, SANTAFICARRA, ELISAACQUAVIVA, ANDREAMACII E. draftCMIG_2011_PORTO.pdf
ALK signaling and target therapy in anaplastic large cell lymphoma / F., Tabbó; A., Barreca; R., Piva; G., Inghirami; R., Bruna; D., Corino; D., Cortese; R., Crescenzo; G., Cuccuru; F., Di Giacomo; A., Fioravanti; M., Ladetto; I., Landra; K., Messana; R., Machiorlatti; B., Martinoglio; E., Medico; M., Mossino; E., Pellegrino; M., Todaro; P., Campisi; L., Chiusa; A., Chiappella; D., Novero; U., Vitolo; Abate, Francesco; Acquaviva, Andrea; Ficarra, Elisa; R., Freilone; M., Chilosi; A., Zamó; F., Facchetti; S., Lonardi; A., De Chiara; F., Fulciniti; C., Doglioni; M., Ponzoni; L., Agnelli; A., Neri; K., Todoerti; C., Agostinelli; P. P., Piccaluga; S., Pileri; B., Falini; E., Tiacci; P., Van Loo; T., Tousseyn; C., De Wolf Peeters; E., Geissinger; H. K., Muller Hermelink; A., Rosenwald; M. A., Pirisand; M. E., Rodriguez; F., Bertoni; M., Boi; I., Kwee. - In: FRONTIERS IN ONCOLOGY. - ISSN 2234-943X. - (2012). [10.3389/fonc.2012.00041] 1-gen-2012 ABATE, FRANCESCOACQUAVIVA, ANDREAFICARRA, ELISA + -
An Automated Tool for Scoring Biomedical Terms Correlation Based on Semantic Analysis / Abate, Francesco; Ficarra, Elisa; Acquaviva, Andrea; Macii, Enrico. - STAMPA. - (2010), pp. 700-705. ((Intervento presentato al convegno 3th International Workshop on Intelligent Informatics in Biology and Medicine tenutosi a Krakow, Poland nel February 15th - 18th [10.1109/CISIS.2010.126]. 1-gen-2010 ABATE, FRANCESCOFICARRA, ELISAACQUAVIVA, ANDREAMACII, Enrico -
An effective grid infrastructure for efficiently support high throughput sequencing analysis / Terzo, Olivier; Mossucca, L.; Ruiu, Pietro; Abate, Francesco; Acquaviva, Andrea; Ficarra, Elisa; Macii, Enrico. - STAMPA. - (2011). ((Intervento presentato al convegno 2nd. International Conference on Engineering and Meta-Engineering (ICEME 2011) tenutosi a Orlando (USA) nel March 27th - 30th, 2011. 1-gen-2011 TERZO, OLIVIERRUIU, PIETROABATE, FRANCESCOACQUAVIVA, ANDREAFICARRA, ELISAMACII, Enrico + -
ANAlyte: a modular image analysis tool for ANA testing with Indirect Immunofluorescence / DI CATALDO, Santa; Tonti, Simone; Bottino, ANDREA GIUSEPPE; Ficarra, Elisa. - In: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE. - ISSN 0169-2607. - STAMPA. - 128:(2016), pp. 86-99. [10.1016/j.cmpb.2016.02.005] 1-gen-2016 DI CATALDO, SANTATONTI, SIMONEBOTTINO, ANDREA GIUSEPPEFICARRA, ELISA manuscript_cmpb_accepted.pdfANAlyte A modular image analysis tool for ANA testing with indirect immunofluorescence.pdf
Aneuploid acute myeloid leukemia exhibits a signature of genomic alterations in the cell cycle and protein degradation machinery / Simonetti, Giorgia; Padella, Antonella; do Valle, Italo Farìa; Fontana, Maria Chiara; Fonzi, Eugenio; Bruno, Samantha; Baldazzi, Carmen; Guadagnuolo, Viviana; Manfrini, Marco; Ferrari, Anna; Paolini, Stefania; Papayannidis, Cristina; Marconi, Giovanni; Franchini, Eugenia; Zuffa, Elisa; Laginestra, Maria Antonella; Zanotti, Federica; Astolfi, Annalisa; Iacobucci, Ilaria; Bernardi, Simona; Sazzini, Marco; Ficarra, Elisa; Hernandez, Jesus Maria; Vandenberghe, Peter; Cools, Jan; Bullinger, Lars; Ottaviani, Emanuela; Testoni, Nicoletta; Cavo, Michele; Haferlach, Torsten; Castellani, Gastone; Remondini, Daniel; Martinelli, Giovanni. - In: CANCER. - ISSN 0008-543X. - ELETTRONICO. - 125:5(2019), pp. 712-725. [10.1002/cncr.31837] 1-gen-2019 Ficarra, Elisa + Simonetti_et_al-2019-Cancer.pdf
Applying Textural Features to the Classification of HEp-2 Cell Patterns in IIF images / DI CATALDO, Santa; Bottino, ANDREA GIUSEPPE; Ficarra, Elisa; Macii, Enrico. - STAMPA. - (2012), pp. 3349-3352. ((Intervento presentato al convegno 21st International Conference on Pattern Recognition (ICPR 2012) tenutosi a Tsukuba, Japan nel November 11-15, 2012. 1-gen-2012 DI CATALDO, SANTABOTTINO, ANDREA GIUSEPPEFICARRA, ELISAMACII, Enrico ICPR2012_PORTO.pdf
Automated 3D immunofluorescence analysis of Dorsal Root Ganglia for the investigation of neural circuit alterations: a preliminary study / DI CATALDO, Santa; Tonti, Simone; Ciglieri, Elisa; Ferrini, Francesco; Macii, Enrico; Ficarra, Elisa; Salio, Chiara. - ELETTRONICO. - 9:(2016), pp. 65-70. ((Intervento presentato al convegno 2016 Federated Conference on Computer Science and Information Systems tenutosi a Gdansk nel 11-14 September 2016 [10.15439/2016F569]. 1-gen-2016 DI CATALDO, SANTATONTI, SIMONEMACII, EnricoFICARRA, ELISA + Manuscript_fed_CR.pdf569.pdf
An automated approach to the segmentation of HEp-2 cells for the indirect immunofluorescence ANA test / Tonti, Simone; DI CATALDO, Santa; Bottino, ANDREA GIUSEPPE; Ficarra, Elisa. - In: COMPUTERIZED MEDICAL IMAGING AND GRAPHICS. - ISSN 0895-6111. - 40:0(2015), pp. 62-69. [10.1016/j.compmedimag.2014.12.005] 1-gen-2015 TONTI, SIMONEDI CATALDO, SANTABOTTINO, ANDREA GIUSEPPEFICARRA, ELISA Manuscript_CMIG_revisedFinal.pdfAn automated approach to the segmentation of HEp-2 cells for the indirect immunofluorescence ANA test.pdf
Automated Discrimination of Pathological Regions in Tissue Images: Unsupervised Clustering vs Supervised SVM Classification / DI CATALDO, Santa; Ficarra, Elisa; Macii, Enrico. - 25:(2008), pp. 344-356. [10.1007/978-3-540-92219-3_26] 1-gen-2008 DI CATALDO, SANTAFICARRA, ELISAMACII, Enrico DiCataldo-FinalSpringer-PORTO.pdf
Automated DNA Fragments Recognition and Sizing through AFM Image Processing / Ficarra, Elisa; Benini, L; Macii, Enrico; Zuccheri, G.. - In: IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE. - ISSN 1089-7771. - 9(4):(2005), pp. 508-517. [10.1109/TITB.2005.855546] 1-gen-2005 FICARRA, ELISAMACII, Enrico + draftTITB_2005.pdf