Archivio Istituzionale della RicercaDERIU, MARCO AGOSTINO
DERIU, MARCO AGOSTINO
Dipartimento di Ingegneria Meccanica e Aerospaziale
017632
A Molecular Dynamics study of a miRNA:mRNA interaction
2011-01-01 Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa; Deriu, MARCO AGOSTINO; Macii, Enrico
ALS2-Related Motor Neuron Diseases: From Symptoms to Molecules
2022-01-01 Miceli, Marcello; Exertier, Cécile; Cavaglia', Marco; Gugole, Elena; Boccardo, Marta; Rita Casaluci, Rossana; Ceccarelli, Noemi; De Maio, Alessandra; Vallone, Beatrice; Deriu, Marco A.
Alteration of Consciousness by Anaesthetics: A Multiscale Modulation from the Molecular to the Systems Level
2022-01-01 Cavaglià, Marco; Zizzi, Eric; Dombrowski, Stephen; Deriu, Marco A.; Tuszynski, Jacek
Alteration of lipid bilayer mechanics by volatile anesthetics: insights from μs-long molecular dynamics simulations
2022-01-01 Zizzi, Eric A.; Cavaglia', Marco; Tuszynski, Jacek A.; Deriu, Marco A.
Aminoacid substitutions in the glycine zipper affect the conformational stability of amyloid beta fibrils
2020-01-01 Grasso, G.; Leanza, L.; Morbiducci, U.; Danani, A.; Deriu, M. A.
Anisotropic Elastic Network Modeling of Entire Microtubules
2010-01-01 Deriu, MARCO AGOSTINO; Soncini, Monica; Orsi, M.; Patel, M.; Essex, J. W.; Montevecchi, Franco Maria; Redaelli, ALBERTO CESARE LUIGI
Biofunctionalization of Silica Nanoparticles with Cell-Penetrating Pepties: Asorption Mechanism an Bining Energy Estimation
2019-01-01 Grasso, G.; Mercuri, S.; Danani, A.; Deriu, M. A.
Biomechanics of actin filaments: a computational multi-level study
2011-01-01 Deriu, MARCO AGOSTINO; Bidone, TAMARA CARLA; Mastrangelo, Francesco; DI BENEDETTO, Giacomo; Soncini, Monica; Montevecchi, Franco Maria; Morbiducci, Umberto
Bioreactors as engineering support to treat cardiac muscle and vascular disease
2013-01-01 Massai, DIANA NADA CATERINA; CERINO ABDIN, Giulia; Gallo, Diego; Pennella, Francesco; Deriu, MARCO AGOSTINO; RODRIGUEZ RUIZ, ANDRES FELIPE; Montevecchi, Franco Maria; Bignardi, Cristina; Audenino, Alberto; Morbiducci, Umberto
Cardiovascular Risk Prediction in Ankylosing Spondylitis: From Traditional Scores to Machine Learning Assessment
2020-01-01 Navarini, Luca; Caso, Francesco; Costa, Luisa; Currado, Damiano; Stola, Liliana; Perrotta, Fabio; Delfino, Lorenzo; Sperti, Michela; Deriu, Marco A.; Ruscitti, Piero; Pavlych, Viktoriya; Corrado, Addolorata; Di Benedetto, Giacomo; Tasso, Marco; Ciccozzi, Massimo; Laudisio, Alice; Lunardi, Claudio; Cantatore, Francesco Paolo; Lubrano, Ennio; Giacomelli, Roberto; Scarpa, Raffaele; Afeltra, Antonella
Cardiovascular risk prediction: from classical statistical methods to machine learning approaches
2022-01-01 Sperti, Michela; Malavolta, Marta; STAUNOVO POLACCO, Federica; Dellavalle, Annalisa; Ruggieri, Rossella; Bergia, Sara; Fazio, Alice; Santoro, Carmine; Deriu, Marco A.
Cell Penetrating Peptide Adsorption on Magnetite and Silica Surfaces: A Computational Investigation
2015-01-01 Grasso, Gianvito; Deriu, MARCO AGOSTINO; Prat, Maria; Rimondini, Lia; Verne', Enrica; Follenzi, Antonia
Cell penetrating peptide modulation of membrane biomechanics by Molecular dynamics
2018-01-01 Grasso, Gianvito; Muscat, Stefano; Rebella, Martina; Morbiducci, Umberto; Audenino, Alberto; Danani, Andrea; Deriu, Marco A.
Characterization of mictrotubules and motor proteins by molecular dynamic simulations
2006-01-01 Soncini, M; Enemark, S; Aprodu, I; Deriu, MARCO AGOSTINO; Gautieri, A; MONTEVECCHI F., M; Redaelli, A.
Characterization of the AXH domain of Ataxin-1 using enhanced sampling and functional mode analysis
2016-01-01 Deriu, MARCO AGOSTINO; Grasso, Gianvito; Tuszynski, Jack A.; Massai, DIANA NADA CATERINA; Gallo, Diego; Morbiducci, Umberto; Danani, Andrea
Coarse Grain Modeling for Microtubule Mechanics
2010-01-01 Deriu, MARCO AGOSTINO; Soncini, Monica; Bidone, TAMARA CARLA; Redaelli, ALBERTO CESARE LUIGI; Montevecchi, Franco Maria
Computational molecular modelling as a platform for a deeper understanding of protein dynamics and rational drug design
2020-01-01 Deriu, Marco A.; Morbiducci, Umberto; Tuszynski, Jack A.; Pallante, Lorenzo; Grasso, Gianvito
Computational study of potential galectin-3 inhibitors in the treatment of covid-19
2021-01-01 Aminpour, M.; Cannariato, M.; Zucco, A.; Di Gregorio, E.; Israel, S.; Perioli, A.; Tucci, D.; Rossi, F.; Pionato, S.; Marino, S.; Deriu, M. A.; Velpula, K. K.; Tuszynski, J. A.
Conformational dynamics and stability of u-shaped and s-shaped amyloid β assemblies
2018-01-01 Grasso, Gianvito; Rebella, Martina; Muscat, Stefano; Morbiducci, Umberto; Tuszynski, Jack; Danani, Andrea; Deriu, Marco A.
Conformational fluctuations of the AXH monomer of Ataxin-1
2015-01-01 Grasso, Gianvito; Deriu, MARCO AGOSTINO; Tuszynski, Jack A.; Gallo, Diego; Morbiducci, Umberto; Danani, Andrea
| Citazione | Data di pubblicazione | Autori | File |
|---|---|---|---|
| A Molecular Dynamics study of a miRNA:mRNA interaction / Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa; Deriu, MARCO AGOSTINO; Macii, Enrico. - In: JOURNAL OF MOLECULAR MODELING. - ISSN 1610-2940. - STAMPA. - 17:11(2011), pp. 2895-2906. [10.1007/s00894-011-0991-x] | 1-gen-2011 | PACIELLO, GIULIAACQUAVIVA, ANDREAFICARRA, ELISADERIU, MARCO AGOSTINOMACII, Enrico | - |
| ALS2-Related Motor Neuron Diseases: From Symptoms to Molecules / Miceli, Marcello; Exertier, Cécile; Cavaglia', Marco; Gugole, Elena; Boccardo, Marta; Rita Casaluci, Rossana; Ceccarelli, Noemi; De Maio, Alessandra; Vallone, Beatrice; Deriu, Marco A.. - In: BIOLOGY. - ISSN 2079-7737. - 11:1(2022), p. 77. [10.3390/biology11010077] | 1-gen-2022 | Marcello MiceliMarco CavagliàMarco A. Deriu + | biology-11-00077-v2.pdf |
| Alteration of Consciousness by Anaesthetics: A Multiscale Modulation from the Molecular to the Systems Level / Cavaglià, Marco; Zizzi, Eric; Dombrowski, Stephen; Deriu, Marco A.; Tuszynski, Jacek. - In: JOURNAL OF CONSCIOUSNESS STUDIES. - ISSN 1355-8250. - STAMPA. - 29:5-6(2022), pp. 21-49. [10.53765/20512201.29.5.021] | 1-gen-2022 | Cavaglià, MarcoZizzi, EricDeriu, Marco A.Tuszynski, Jacek + | - |
| Alteration of lipid bilayer mechanics by volatile anesthetics: insights from μs-long molecular dynamics simulations / Zizzi, Eric A.; Cavaglia', Marco; Tuszynski, Jacek A.; Deriu, Marco A.. - In: ISCIENCE. - ISSN 2589-0042. - ELETTRONICO. - (2022). [10.1016/j.isci.2022.103946] | 1-gen-2022 | Eric A. ZizziMarco CavagliàJacek A. TuszynskiMarco A. Deriu | 1-s2.0-S2589004222002164-main.pdf; PIIS2589004222002164.pdf |
| Aminoacid substitutions in the glycine zipper affect the conformational stability of amyloid beta fibrils / Grasso, G.; Leanza, L.; Morbiducci, U.; Danani, A.; Deriu, M. A.. - In: JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS. - ISSN 0739-1102. - 38:13(2020), pp. 3908-3915. [10.1080/07391102.2019.1671224] | 1-gen-2020 | Leanza L.Morbiducci U.Deriu M. A. + | Aminoacid substitutions in the glycine zipper affect the conformational stability of amyloid beta fibrils.pdf; tbsd_a_1671224_sm4594.pdf; Paper.pdf |
| Anisotropic Elastic Network Modeling of Entire Microtubules / Deriu, MARCO AGOSTINO; Soncini, Monica; Orsi, M.; Patel, M.; Essex, J. W.; Montevecchi, Franco Maria; Redaelli, ALBERTO CESARE LUIGI. - In: BIOPHYSICAL JOURNAL. - ISSN 0006-3495. - ELETTRONICO. - 99:(2010), pp. 2190-2199. [10.1016/j.bpj.2010.06.070] | 1-gen-2010 | DERIU, MARCO AGOSTINOSONCINI, MONICAMONTEVECCHI, Franco MariaREDAELLI, ALBERTO CESARE LUIGI + | - |
| Biofunctionalization of Silica Nanoparticles with Cell-Penetrating Pepties: Asorption Mechanism an Bining Energy Estimation / Grasso, G.; Mercuri, S.; Danani, A.; Deriu, M. A.. - In: JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL. - ISSN 1520-6106. - 123:50(2019), pp. 10622-10630. [10.1021/acs.jpcb.9b08106] | 1-gen-2019 | Deriu M. A. + | - |
| Biomechanics of actin filaments: a computational multi-level study / Deriu, MARCO AGOSTINO; Bidone, TAMARA CARLA; Mastrangelo, Francesco; DI BENEDETTO, Giacomo; Soncini, Monica; Montevecchi, Franco Maria; Morbiducci, Umberto. - In: JOURNAL OF BIOMECHANICS. - ISSN 0021-9290. - ELETTRONICO. - 44:4(2011), pp. 630-636. [10.1016/j.jbiomech.2010.11.014] | 1-gen-2011 | DERIU, MARCO AGOSTINOBIDONE, TAMARA CARLAMASTRANGELO, FRANCESCODI BENEDETTO, GIACOMOSONCINI, MONICAMONTEVECCHI, Franco MariaMORBIDUCCI, UMBERTO | BM5049.pdf; 2375658.pdf |
| Bioreactors as engineering support to treat cardiac muscle and vascular disease / Massai, DIANA NADA CATERINA; CERINO ABDIN, Giulia; Gallo, Diego; Pennella, Francesco; Deriu, MARCO AGOSTINO; RODRIGUEZ RUIZ, ANDRES FELIPE; Montevecchi, Franco Maria; Bignardi, Cristina; Audenino, Alberto; Morbiducci, Umberto. - In: JOURNAL OF HEALTHCARE ENGINEERING. - ISSN 2040-2295. - STAMPA. - 4:3(2013), pp. 329-370. [10.1260/2040-2295.4.3.329] | 1-gen-2013 | MASSAI, DIANA NADA CATERINACERINO ABDIN, GIULIAGALLO, DIEGOPENNELLA, FRANCESCODERIU, MARCO AGOSTINORODRIGUEZ RUIZ, ANDRES FELIPEMONTEVECCHI, Franco MariaBIGNARDI, CRISTINAAUDENINO, AlbertoMORBIDUCCI, UMBERTO | REVIEW BIOREATTORI Journal of Healthcare Engineering 2013.pdf |
| Cardiovascular Risk Prediction in Ankylosing Spondylitis: From Traditional Scores to Machine Learning Assessment / Navarini, Luca; Caso, Francesco; Costa, Luisa; Currado, Damiano; Stola, Liliana; Perrotta, Fabio; Delfino, Lorenzo; Sperti, Michela; Deriu, Marco A.; Ruscitti, Piero; Pavlych, Viktoriya; Corrado, Addolorata; Di Benedetto, Giacomo; Tasso, Marco; Ciccozzi, Massimo; Laudisio, Alice; Lunardi, Claudio; Cantatore, Francesco Paolo; Lubrano, Ennio; Giacomelli, Roberto; Scarpa, Raffaele; Afeltra, Antonella. - In: RHEUMATOLOGY AND THERAPY. - ISSN 2198-6576. - 7:4(2020), pp. 867-882. [10.1007/s40744-020-00233-4] | 1-gen-2020 | Sperti, MichelaDeriu, Marco A. + | Navarini_AS.pdf |
| Cardiovascular risk prediction: from classical statistical methods to machine learning approaches / Sperti, Michela; Malavolta, Marta; STAUNOVO POLACCO, Federica; Dellavalle, Annalisa; Ruggieri, Rossella; Bergia, Sara; Fazio, Alice; Santoro, Carmine; Deriu, Marco A.. - In: MINERVA CARDIOLOGY AND ANGIOLOGY. - ISSN 2724-5683. - 70:1(2022). [10.23736/S2724-5683.21.05868-3] | 1-gen-2022 | SPERTI, MichelaMALAVOLTA, MartaDERIU, Marco A. + | Post-print.pdf |
| Cell Penetrating Peptide Adsorption on Magnetite and Silica Surfaces: A Computational Investigation / Grasso, Gianvito; Deriu, MARCO AGOSTINO; Prat, Maria; Rimondini, Lia; Verne', Enrica; Follenzi, Antonia. - In: JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL. - ISSN 1520-6106. - ELETTRONICO. - 119:26(2015), pp. 8239-8246. [10.1021/jp512782e] | 1-gen-2015 | DERIU, MARCO AGOSTINOVERNE', Enrica + | - |
| Cell penetrating peptide modulation of membrane biomechanics by Molecular dynamics / Grasso, Gianvito; Muscat, Stefano; Rebella, Martina; Morbiducci, Umberto; Audenino, Alberto; Danani, Andrea; Deriu, Marco A.. - In: JOURNAL OF BIOMECHANICS. - ISSN 0021-9290. - 73:(2018), pp. 137-144. [10.1016/j.jbiomech.2018.03.036] | 1-gen-2018 | Muscat, StefanoRebella, MartinaMorbiducci, UmbertoAudenino, AlbertoDeriu, Marco A. + | Cell penetrating peptide modulation of membrane biomechanics by Molecular dynamics _ Elsevier Enhanced Reader.pdf |
| Characterization of mictrotubules and motor proteins by molecular dynamic simulations / Soncini, M; Enemark, S; Aprodu, I; Deriu, MARCO AGOSTINO; Gautieri, A; MONTEVECCHI F., M; Redaelli, A.. - In: BOLLETTINO DEL C.I.L.E.A.. - ISSN 1120-2440. - (2006), pp. 121-134. | 1-gen-2006 | DERIU, MARCO AGOSTINO + | - |
| Characterization of the AXH domain of Ataxin-1 using enhanced sampling and functional mode analysis / Deriu, MARCO AGOSTINO; Grasso, Gianvito; Tuszynski, Jack A.; Massai, DIANA NADA CATERINA; Gallo, Diego; Morbiducci, Umberto; Danani, Andrea. - In: PROTEINS. - ISSN 0887-3585. - 84:5(2016), pp. 666-673. [10.1002/prot.25017] | 1-gen-2016 | DERIU, MARCO AGOSTINOMASSAI, DIANA NADA CATERINAGALLO, DIEGOMORBIDUCCI, UMBERTO + | - |
| Coarse Grain Modeling for Microtubule Mechanics / Deriu, MARCO AGOSTINO; Soncini, Monica; Bidone, TAMARA CARLA; Redaelli, ALBERTO CESARE LUIGI; Montevecchi, Franco Maria. - ELETTRONICO. - 638 - 642:(2010), pp. 629-634. [10.4028/www.scientific.net/MSF.638-642.629] | 1-gen-2010 | DERIU, MARCO AGOSTINOSONCINI, MONICABIDONE, TAMARA CARLAREDAELLI, ALBERTO CESARE LUIGIMONTEVECCHI, Franco Maria | - |
| Computational molecular modelling as a platform for a deeper understanding of protein dynamics and rational drug design / Deriu, Marco A.; Morbiducci, Umberto; Tuszynski, Jack A.; Pallante, Lorenzo; Grasso, Gianvito. - In: BIOMEDICAL SCIENCE AND ENGINEERING. - ISSN 2531-9892. - (2020). [10.4081/bse.2019.87] | 1-gen-2020 | Deriu, Marco A.Morbiducci, UmbertoPallante, Lorenzo + | Grasso et al. - 2020 - Computational molecular modelling as a platform for a deeper understanding of protein dynamics and rational drug.pdf |
| Computational study of potential galectin-3 inhibitors in the treatment of covid-19 / Aminpour, M.; Cannariato, M.; Zucco, A.; Di Gregorio, E.; Israel, S.; Perioli, A.; Tucci, D.; Rossi, F.; Pionato, S.; Marino, S.; Deriu, M. A.; Velpula, K. K.; Tuszynski, J. A.. - In: BIOMEDICINES. - ISSN 2227-9059. - 9:9(2021), p. 1208. [10.3390/biomedicines9091208] | 1-gen-2021 | Cannariato M.Zucco A.Di Gregorio E.Israel S.Tucci D.Rossi F.Pionato S.Deriu M. A.Tuszynski J. A. + | biomedicines-09-01208.pdf |
| Conformational dynamics and stability of u-shaped and s-shaped amyloid β assemblies / Grasso, Gianvito; Rebella, Martina; Muscat, Stefano; Morbiducci, Umberto; Tuszynski, Jack; Danani, Andrea; Deriu, Marco A.. - In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. - ISSN 1661-6596. - ELETTRONICO. - 19:2(2018), p. 571. [10.3390/ijms19020571] | 1-gen-2018 | Rebella, MartinaMuscat, StefanoMorbiducci, UmbertoDeriu, Marco A. + | IJMS 2018.pdf |
| Conformational fluctuations of the AXH monomer of Ataxin-1 / Grasso, Gianvito; Deriu, MARCO AGOSTINO; Tuszynski, Jack A.; Gallo, Diego; Morbiducci, Umberto; Danani, Andrea. - In: PROTEINS. - ISSN 1097-0134. - (2015). [10.1002/prot.24954] | 1-gen-2015 | DERIU, MARCO AGOSTINOGALLO, DIEGOMORBIDUCCI, UMBERTO + | - |