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ABATE, FRANCESCO

ABATE, FRANCESCO  

Dipartimento di Automatica e Informatica  

018415  

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Risultati 1 - 20 di 29 (tempo di esecuzione: 0.05 secondi).
Citazione Data di pubblicazione Autori File
Pegasus: a comprehensive annotation and prediction tool for detection of driver gene fusions in cancer / Abate, Francesco; Sakellarios, Zairis; Ficarra, Elisa; Acquaviva, Andrea; Chris H., Wiggins; Veronique, Frattini; Anna, Lasorella; Antonio, Iavarone; Giorgio, Inghirami; Raul, Rabadan. - In: BMC SYSTEMS BIOLOGY. - ISSN 1752-0509. - ELETTRONICO. - 8:97(2014). [10.1186/s12918-014-0097-z] 1-gen-2014 ABATE, FRANCESCOFICARRA, ELISAACQUAVIVA, ANDREA + s12918-014-0097-z.pdf
Recurrent mutations in epigenetic regulators, RHOA and FYN kinase in peripheral T cell lymphomas / T., Palomero; L., Couronné; Hossein, Khiabanian; M., Kim; Alberto Ambesi, Impiombato; A., Perez Garcia; Zachary Wayne, Carpenter; Abate, Francesco; M., Allegretta; Je, Haydu; X., Jiang; Is, Lossos; Balbin, Nicolas; Bhagat, Bastard; Ma, Piris; E., Campo; O., Bernard; Rabadan R., Raul; Aa, Ferrando. - In: NATURE GENETICS. - ISSN 1061-4036. - 46:(2014), pp. 166-170. 1-gen-2014 ABATE, FRANCESCO + -
A novel pipeline for V(D)J junction identification using RNA-Seq paired-end reads / Paciello, Giulia; Ficarra, Elisa; Alberto, Zamò; Chiara, Pighi; Carmelo, Foti; Abate, Francesco; Macii, Enrico; Acquaviva, Andrea. - STAMPA. - (2013). (Intervento presentato al convegno Bioinformatics 2013, International Conference on Bioinformatics Models, Methods and Algorithms tenutosi a Barcelona, Spain nel 11-14 February 2013). 1-gen-2013 PACIELLO, GIULIAFICARRA, ELISAABATE, FRANCESCOMACII, EnricoACQUAVIVA, ANDREA + Biostec_camera_ready.pdf
Gelsius: A Literature-Based Workflow for Determining Quantitative Associations between Genes and Biological Processes / Abate, Francesco; Acquaviva, Andrea; Ficarra, Elisa; Piva, R.; Macii, Enrico. - In: IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS. - ISSN 1545-5963. - STAMPA. - 10:3(2013), pp. 619-631. [10.1109/TCBB.2013.11] 1-gen-2013 ABATE, FRANCESCOACQUAVIVA, ANDREAFICARRA, ELISAMACII, Enrico + -
Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases / Abate, Francesco; Ficarra, Elisa; Acquaviva, Andrea; Macii, Enrico. - STAMPA. - 273:(2013), pp. 173-187. (Intervento presentato al convegno 4th International Joint Conference, BIOSTEC tenutosi a Rome, Italy nel January 26-29, 2011) [10.1007/978-3-642-29752-6_13]. 1-gen-2013 ABATE, FRANCESCOFICARRA, ELISAACQUAVIVA, ANDREAMACII, Enrico -
Integration of Literature with Heterogeneous Information for Genes Correlation Scoring / Abate, Francesco; Acquaviva, Andrea; Ficarra, Elisa; Macii, Enrico. - In: ACM JOURNAL ON EMERGING TECHNOLOGIES IN COMPUTING SYSTEMS. - ISSN 1550-4832. - STAMPA. - 9:4(2013). [10.1145/2504728] 1-gen-2013 ABATE, FRANCESCOACQUAVIVA, ANDREAFICARRA, ELISAMACII, Enrico -
Recurrent Rhoa Mutations In Peripheral T-Cell Lymphoma / T., Palomero; L., Couronne; H., Khiabanian; M., Kim; A., Ambesi; Z., Carpenter; Abate, Francesco; M., Allegretta; I. S., Lossos; C., Nicolas; M., Balbin; C., Bastard; G., Bhagat; M. A., A.; E., Campo; O. A., Bernard; R., Rabadan. - In: BLOOD. - ISSN 0006-4971. - 122:(2013), p. 846. 1-gen-2013 ABATE, FRANCESCO + -
The integrated landscape of driver genomic alterations in glioblastoma / Veronique, Frattini; Vladimir, Trifonov; Joseph Minhow, Chan; Angelica, Castano; Marie, Lia; Abate, Francesco; Stephen T., Keir; Alan X., Ji; Pietro, Zoppoli; Francesco, Niola; Carla, Danussi; Igor, Dolgalev; Paola, Porrati; Serena, Pellegatta; Adriana, Heguy; Gaurav, Gupta; David J., Pisapia; Peter, Canoll; Jeffrey N., Bruce; Roger E., Mclendon; Hai, Yan; Ken, Aldape; Gaetano, Finocchiaro; Tom, Mikkelsen; Gilbert G., Privé; Darell D., Bigner; Anna, Lasorella; Raul, Rabadan; Antonio, Iavarone. - In: NATURE GENETICS. - ISSN 1061-4036. - (2013). [10.1038/ng.2734] 1-gen-2013 ABATE, FRANCESCO + -
A Cloud Infrastructure for Optimization of a Massive Parallel Sequencing Workflow / Terzo, Olivier; Mossucca, L; Acquaviva, Andrea; Abate, Francesco; Provenzano, R.. - ELETTRONICO. - (2012). (Intervento presentato al convegno 2012 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (ccgrid 2012) tenutosi a Ottawa, Canada nel May 13-May 16 2012) [10.1109/CCGrid.2012.91]. 1-gen-2012 TERZO, OLIVIERACQUAVIVA, ANDREAABATE, FRANCESCO + CCGrid2012_BIO.pdf
A NOVEL ANALYSIS FLOW FOR FUSED TRANSCRIPTS DISCOVERY FROM PAIRED-END RNA-SEQ DATA / Abate, Francesco; Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa; Ferrarini, A.; Delledonne, M.; Macii, Enrico. - STAMPA. - (2012), pp. 331-334. (Intervento presentato al convegno International Conference on Bioinformatics Models, Methods and Algorithms (BIOINFORMATICS 2012) tenutosi a Vilamoura, Algarve (Portugal) nel 1-4 February 2012) [10.5220/0003789003310334]. 1-gen-2012 ABATE, FRANCESCOPACIELLO, GIULIAACQUAVIVA, ANDREAFICARRA, ELISAMACII, Enrico + -
ALK signaling and target therapy in anaplastic large cell lymphoma / F., Tabbó; A., Barreca; R., Piva; G., Inghirami; R., Bruna; D., Corino; D., Cortese; R., Crescenzo; G., Cuccuru; F., Di Giacomo; A., Fioravanti; M., Ladetto; I., Landra; K., Messana; R., Machiorlatti; B., Martinoglio; E., Medico; M., Mossino; E., Pellegrino; M., Todaro; P., Campisi; L., Chiusa; A., Chiappella; D., Novero; U., Vitolo; Abate, Francesco; Acquaviva, Andrea; Ficarra, Elisa; R., Freilone; M., Chilosi; A., Zamó; F., Facchetti; S., Lonardi; A., De Chiara; F., Fulciniti; C., Doglioni; M., Ponzoni; L., Agnelli; A., Neri; K., Todoerti; C., Agostinelli; P. P., Piccaluga; S., Pileri; B., Falini; E., Tiacci; P., Van Loo; T., Tousseyn; C., De Wolf Peeters; E., Geissinger; H. K., Muller Hermelink; A., Rosenwald; M. A., Pirisand; M. E., Rodriguez; F., Bertoni; M., Boi; I., Kwee. - In: FRONTIERS IN ONCOLOGY. - ISSN 2234-943X. - (2012). [10.3389/fonc.2012.00041] 1-gen-2012 ABATE, FRANCESCOACQUAVIVA, ANDREAFICARRA, ELISA + -
Bellerophontes: a RNA-seq data analysis framework tor chimeric transcripts discovery base on accurate fusion model / Abate, Francesco; Acquaviva, Andrea; Paciello, Giulia; Foti, Carmelo; Ficarra, Elisa; Ferrarini, A.; Delle donne, M.; Iacobucci, I.; Soverini, S.; Martinelli, G.; Macii, Enrico. - In: BIOINFORMATICS. - ISSN 1367-4803. - STAMPA. - 28:16(2012), pp. 2114-2121. [10.1093/bioinformatics/bts334] 1-gen-2012 ABATE, FRANCESCOACQUAVIVA, ANDREAPACIELLO, GIULIAFOTI, CARMELOFICARRA, ELISAMACII, Enrico + -
Middleware services for network interoperability in smart energy efficient buildings / Patti, E.; Acquaviva, A.; Abate, F.; Osello, A.; Cocuccio, A.; Jahn, M.; Jentsch, M.; Macii, E.. - (2012), pp. 338-339. (Intervento presentato al convegno 2012 Design, Automation & Test in Europe Conference & Exhibition (DATE) tenutosi a Dresden, Germany nel 12-16 March 2012) [10.1109/DATE.2012.6176491]. 1-gen-2012 Patti, E.Acquaviva, A.Abate, F.Osello, A.Macii, E. + CR - Middleware Services for Network Interoperability in Smart Energy Efficient Buildings.pdf; Middleware_services_for_network_interoperability_in_smart_energy_efficient_buildings.pdf
Middleware Services for Network Interoperability in Smart Energy Efficient Buildings / Patti, Edoardo; Acquaviva, Andrea; Abate, Francesco; Osello, Anna; Cocuccio, A.; Jahn, M.; Jentsch, M.; Macii, Enrico. - (2012), pp. 338-340. (Intervento presentato al convegno DATE’12, Design, Automation & Test in Europe tenutosi a Dresden, Germany nel March 12th-16th, 2012). 1-gen-2012 PATTI, EDOARDOACQUAVIVA, ANDREAABATE, FRANCESCOOSELLO, AnnaMACII, Enrico + -
Optimizing Splicing Junction Detection in Next Generation Sequencing Data on a Virtual-GRID Infrastructure / Terzo, Olivier; Mossucca, L; Acquaviva, Andrea; Abate, Francesco; Ficarra, Elisa; Provenzano, R.. - (2012). (Intervento presentato al convegno The 6th International Conference on Bioinformatics and Biomedical Engineering tenutosi a Shanghai nel 17-20 My 2012). 1-gen-2012 TERZO, OLIVIERACQUAVIVA, ANDREAABATE, FRANCESCOFICARRA, ELISA + iCBBE2012_BIO.pdf
Reverse Engineering of TopHat: Splice Junction Mapper for Improving Computational Aspect / Terzo, Olivier; Mossucca, L; Acquaviva, Andrea; Abate, Francesco; Ficarra, Elisa; Provenzano, R.. - ELETTRONICO. - (2012). (Intervento presentato al convegno ISMS 2012 - 3rd International Conference on Intelligent Systems, Modelling and Simulation tenutosi a Kota Kinabalu nel 8 – 10 February 2012) [10.1109/ISMS.2012.76]. 1-gen-2012 TERZO, OLIVIERACQUAVIVA, ANDREAABATE, FRANCESCOFICARRA, ELISA + ISMS2012_BIO_or.pdf
Virtual Environment for Next Generation Sequencing Analysis / Terzo, Olivier; Mossucca, L; Acquaviva, Andrea; Abate, Francesco; Provenzano, R.. - ELETTRONICO. - (2012). (Intervento presentato al convegno The Eighth International Conference on Networking and Services tenutosi a St. Maarten, Netherlands Antilles nel March 25-30, 2012). 1-gen-2012 TERZO, OLIVIERACQUAVIVA, ANDREAABATE, FRANCESCO + ICNS2012_BIO_or.pdf
A New Latent Semantic Analysis Based Methodology For Knowledge Extraction From Biomedical Literature And Biological Pathways Databases / Abate, Francesco; Ficarra, Elisa; Acquaviva, Andrea; Macii, Enrico. - STAMPA. - (2011), pp. 66-74. (Intervento presentato al convegno BIOINFORMATICS, International Conference on Bionformatics Models, Methods and Algorithms tenutosi a Rome, Italy nel 26-29 January 2011). 1-gen-2011 ABATE, FRANCESCOFICARRA, ELISAACQUAVIVA, ANDREAMACII, Enrico -
A novel framework for chimeric transcript detection based on accurate gene fusion model / Abate, Francesco; Acquaviva, Andrea; Ficarra, Elisa; Paciello, Giulia; Macii, Enrico; A., Ferrarini; M., Delledonne; S., Soverini; G., Martinelli. - STAMPA. - (2011), pp. 34-41. (Intervento presentato al convegno IEEE International Conference on Bioinformatics and Biomedicine tenutosi a Atlanta, Georgia (USA) nel 12-15 Nov. 2011) [10.1109/BIBMW.2011.6112352]. 1-gen-2011 ABATE, FRANCESCOACQUAVIVA, ANDREAFICARRA, ELISAPACIELLO, GIULIAMACII, Enrico + 2443775-mod.pdf
An effective grid infrastructure for efficiently support high throughput sequencing analysis / Terzo, Olivier; Mossucca, L.; Ruiu, Pietro; Abate, Francesco; Acquaviva, Andrea; Ficarra, Elisa; Macii, Enrico. - STAMPA. - (2011). (Intervento presentato al convegno 2nd. International Conference on Engineering and Meta-Engineering (ICEME 2011) tenutosi a Orlando (USA) nel March 27th - 30th, 2011). 1-gen-2011 TERZO, OLIVIERRUIU, PIETROABATE, FRANCESCOACQUAVIVA, ANDREAFICARRA, ELISAMACII, Enrico + -