Automatic segmentation of the prostate on Magnetic Resonance Imaging (MRI) is one of the topics on which research has focused in recent years as it is a fundamental first step in the building process of a Computer aided diagnosis (CAD) system for cancer detection. Unfortunately, MRI acquired in different centers with different scanners leads to images with different characteristics. In this work, we propose an automatic algorithm for prostate segmentation, based on a U-Net applying transfer learning method in a bi-center setting. First, T2w images with and without endorectal coil from 80 patients acquired at Center A were used as training set and internal validation set. Then, T2w images without endorectal coil from 20 patients acquired at Center B were used as external validation. The reference standard for this study was manual segmentation of the prostate gland performed by an expert operator. The results showed a Dice similarity coefficient >85% in both internal and external validation datasets.Clinical Relevance- This segmentation algorithm could be integrated into a CAD system to optimize computational effort in prostate cancer detection.

Deep learning model for automatic prostate segmentation on bicentric T2w images with and without endorectal coil / Barra, D; Nicoletti, G; Defeudis, A; Mazzetti, S; Panic, J; Gatti, M; Faletti, R; Russo, F; Regge, D; Giannini, V. - ELETTRONICO. - 2021:(2021), pp. 3370-3373. (Intervento presentato al convegno 2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) tenutosi a Mexico nel 1-5 Nov. 2021) [10.1109/embc46164.2021.9630792].

Deep learning model for automatic prostate segmentation on bicentric T2w images with and without endorectal coil

Nicoletti G;Panic J;Giannini V
2021

Abstract

Automatic segmentation of the prostate on Magnetic Resonance Imaging (MRI) is one of the topics on which research has focused in recent years as it is a fundamental first step in the building process of a Computer aided diagnosis (CAD) system for cancer detection. Unfortunately, MRI acquired in different centers with different scanners leads to images with different characteristics. In this work, we propose an automatic algorithm for prostate segmentation, based on a U-Net applying transfer learning method in a bi-center setting. First, T2w images with and without endorectal coil from 80 patients acquired at Center A were used as training set and internal validation set. Then, T2w images without endorectal coil from 20 patients acquired at Center B were used as external validation. The reference standard for this study was manual segmentation of the prostate gland performed by an expert operator. The results showed a Dice similarity coefficient >85% in both internal and external validation datasets.Clinical Relevance- This segmentation algorithm could be integrated into a CAD system to optimize computational effort in prostate cancer detection.
File in questo prodotto:
File Dimensione Formato  
Deep_learning_model_for_automatic_prostate_segmentation_on_bicentric_T2w_images_with_and_without_endorectal_coil.pdf

non disponibili

Descrizione: Conference proceeding
Tipologia: 2a Post-print versione editoriale / Version of Record
Licenza: Non Pubblico - Accesso privato/ristretto
Dimensione 1.1 MB
Formato Adobe PDF
1.1 MB Adobe PDF   Visualizza/Apri   Richiedi una copia
Barra_EMBC2021.pdf

accesso aperto

Descrizione: Conference proceeding
Tipologia: 2. Post-print / Author's Accepted Manuscript
Licenza: PUBBLICO - Tutti i diritti riservati
Dimensione 369.18 kB
Formato Adobe PDF
369.18 kB Adobe PDF Visualizza/Apri
Pubblicazioni consigliate

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11583/2952164