Archivio Istituzionale della RicercaTUSZYNSKI, JACEK ADAM
TUSZYNSKI, JACEK ADAM
Dipartimento di Ingegneria Meccanica e Aerospaziale
046949
Delineating SARS-CoV-2 spike protein and antibodies interaction interfaces via siamese neural networks: A geometric and image-based analysis
2025 Loreti, Gemma; Vottero, Paola; Olivetti, Elena Carlotta; Vezzetti, Enrico; Tuszynski, Jacek Adam; Marcolin, Federica; Aminpour, Maral
An In Silico Investigation of the Molecular Interactions between Volatile Anesthetics and Actin
2024 Truglia, Barbara; Carbone, Nicola; Ghadre, Ibrahim; Vallero, Sara; Zito, Marinella; Zizzi, Eric Adriano; Deriu, Marco Agostino; Tuszynski, Jacek
Multiscale Computational Analysis of the Effect of Taxol on Microtubule Mechanics
2024 Cannariato, Marco; Zizzi, Eric A.; Tuszynski, Jacek A.; Deriu, Marco A.
Understanding the contagiousness of Covid-19 strains: A Geometric approach
2024 Vottero, Paola; Olivetti, ELENA CARLOTTA; Chiara D'Agostino, Lucia; Di Grazia, Luca; Vezzetti, Enrico; Aminpour, Maral; Tuszynski, JACEK ADAM; Marcolin, Federica
Electronic energy migration in Microtubules
2023 Kalra, Aarat P.; Benny, Alfy; Travis, Sophie M.; Zizzi, Eric A.; Morales-Sanchez, Austin; Oblinsky, Daniel G.; Craddock, Travis J. A.; Hameroff, Stuart R.; Bruce MacIver, M.; Tuszynski, Jacek A.; Petry, Sabine; Penrose, Roger; Scholes, Gregory D.
Alteration of Consciousness by Anaesthetics: A Multiscale Modulation from the Molecular to the Systems Level
2022 Cavaglià, Marco; Zizzi, Eric; Dombrowski, Stephen; Deriu, Marco A.; Tuszynski, Jacek
Alteration of lipid bilayer mechanics by volatile anesthetics: insights from μs-long molecular dynamics simulations
2022 Zizzi, Eric A.; Cavaglia', Marco; Tuszynski, Jacek A.; Deriu, Marco A.
In Silico Analysis of the Multi-Targeted Mode of Action of Ivermectin and Related Compounds
2022 Aminpour, Maral; Cannariato, Marco; Preto, Jordane; Ehsan Safaeeardebili, M.; Moracchiato, Alexia; Doria, Domiziano; Donato, FRANCESCA DONATELLA; Zizzi, ERIC ADRIANO; Deriu, MARCO AGOSTINO; Scheim, David E.; Santin, Alessandro D.; Tuszynski, JACEK ADAM
Insights into the interaction dynamics between volatile anesthetics and tubulin through computational molecular modelling
2022 Zizzi, Eric A.; Cavaglià, Marco; Tuszynski, JACEK ADAM; Deriu, Marco A.
A new method for protein characterization and classification using geometrical features for 3D face analysis: An example of tubulin structures
2021 Di Grazia, L.; Aminpour, M.; Vezzetti, E.; Rezania, V.; Marcolin, F.; Tuszynski, J. A.
Computational study of potential galectin-3 inhibitors in the treatment of covid-19
2021 Aminpour, M.; Cannariato, M.; Zucco, A.; Di Gregorio, E.; Israel, S.; Perioli, A.; Tucci, D.; Rossi, F.; Pionato, S.; Marino, S.; Deriu, M. A.; Velpula, K. K.; Tuszynski, J. A.
Enhancing the activity of platinum-based drugs by improved inhibitors of ERCC1–XPF-mediated DNA repair
2021 Ciniero, G.; Elmenoufy, A. H.; Gentile, F.; Weinfeld, M.; Deriu, M. A.; West, F. G.; Tuszynski, J. A.; Dumontet, C.; Cros-Perrial, E.; Jordheim, L. P.
JAK Inhibitors in Immune-Mediated Rheumatic Diseases: from a Molecular Perspective to Clinical Studies
2021 Sperti, Michela; Malavolta, Marta; Ciniero, Gloria; Borrelli, Simone; Cavaglià, Marco; Muscat, Stefano; Tuszynski, JACEK ADAM; Afeltra, Antonella; Paolo Emanuele Margiotta, Domenico; Navarini, Luca
In silico Investigations of the Mode of Action of Novel Colchicine Derivatives Targeting β-Tubulin Isotypes: A Search for a Selective and Specific β-III Tubulin Ligand
2020 Pallante, L.; Rocca, A.; Klejborowska, G.; Huczynski, A.; Grasso, G.; Tuszynski, J. A.; Deriu, M. A.
Using the gibbs function as a measure of human brain development trends from fetal stage to advanced age
2020 Rietman, E. A.; Taylor, S.; Siegelmann, H. T.; Deriu, M. A.; Cavaglia, M.; Tuszynski, J. A.
The role of structural polymorphism in driving the mechanical performance of the alzheimer's beta amyloid fibrils
2019 Grasso, G.; Rebella, M.; Morbiducci, U.; Tuszynski, J. A.; Danani, A.; Deriu, M. A.
A novel interaction between the TLR7 and a colchicine derivative revealed through a computational and experimental study
2018 Gentile, Francesco; Deriu, Marco A.; Barakat, Khaled H.; Danani, Andrea; Tuszynski, Jacek A.
Are there optical communication channels in the brain?
2018 Zarkeshian, Parisa; Kumar, Sourabh; Tuszynski, JACEK ADAM; Barclay, Paul; Simon, Christoph
Comparative analyses and structural insights of the novel cytochrome P450 fusion protein family CYP5619 in Oomycetes
2018 Denis Bamal, Hans; Chen, Wanping; Sitheni Mashele, Samson; Nelson, David R.; Paul Kappo, Abidemi; Anthony Mosa, Rebamang; Yu, Jae-Hyuk; Tuszynski, JACEK ADAM; Syed, Khajamohiddin
Computational Characterization of Small Molecules Binding to the Human XPF Active Site and Virtual Screening to Identify Potential New DNA Repair Inhibitors Targeting the ERCC1-XPF Endonuclease
2018 Gentile, Francesco; Barakat, Khaled H.; Tuszynski, JACEK ADAM
| Citazione | Data di pubblicazione | Autori | File |
|---|---|---|---|
| Delineating SARS-CoV-2 spike protein and antibodies interaction interfaces via siamese neural networks: A geometric and image-based analysis / Loreti, G., Vottero, P., Olivetti, E.C., Vezzetti, E., Tuszynski, J.A., Marcolin, F., Aminpour, M.. - In: PLOS ONE. - ISSN 1932-6203. - 20:11(2025). [10.1371/journal.pone.0335270] | 1-gen-2025 | Olivetti, Elena CarlottaVezzetti, EnricoTuszynski, Jacek AdamMarcolin, Federica + | journal.pone.0335270.pdf |
| An In Silico Investigation of the Molecular Interactions between Volatile Anesthetics and Actin / Truglia, B., Carbone, N., Ghadre, I., Vallero, S., Zito, M., Zizzi, E.A., Deriu, M.A., Tuszynski, J.. - In: PHARMACEUTICALS. - ISSN 1424-8247. - ELETTRONICO. - 17:1(2024). [10.3390/ph17010037] | 1-gen-2024 | Truglia, BarbaraGhadre,IbrahimZizzi, Eric AdrianoDeriu, Marco AgostinoTuszynski, Jacek + | pharmaceuticals-17-00037-1.pdf |
| Multiscale Computational Analysis of the Effect of Taxol on Microtubule Mechanics / Cannariato, M., Zizzi, E.A., Tuszynski, J.A., Deriu, M.A.. - In: ACS BIOMATERIALS SCIENCE & ENGINEERING. - ISSN 2373-9878. - 10:9(2024), pp. 5666-5674. [10.1021/acsbiomaterials.4c00847] | 1-gen-2024 | Cannariato, MarcoZizzi, Eric A.Tuszynski, Jacek A.Deriu, Marco A. | cannariato-et-al-2024-multiscale-computational-analysis-of-the-effect-of-taxol-on-microtubule-mechanics.pdf |
| Understanding the contagiousness of Covid-19 strains: A Geometric approach / Vottero, P., Olivetti, E.C., Chiara D'Agostino, L., Di Grazia, L., Vezzetti, E., Aminpour, M., Tuszynski, J.A., Marcolin, F.. - In: JOURNAL OF MOLECULAR GRAPHICS & MODELLING. - ISSN 1093-3263. - 126:(2024). [10.1016/j.jmgm.2023.108670] | 1-gen-2024 | Elena Carlotta OlivettiEnrico VezzettiJacek Adam TuszynskiFederica Marcolin + | paper_covid.pdf |
| Electronic energy migration in Microtubules / Kalra, A.P., Benny, A., Travis, S.M., Zizzi, E.A., Morales-Sanchez, A., Oblinsky, D.G., Craddock, T.J.A., Hameroff, S.R., Bruce MacIver, M., Tuszynski, J.A., Petry, S., Penrose, R., Scholes, G.D.. - In: ACS CENTRAL SCIENCE. - ISSN 2374-7951. - (2023). [10.1021/acscentsci.2c01114] | 1-gen-2023 | Eric A. ZizziJacek A. Tuszynski + | acscentsci.2c01114.pdf |
| Alteration of Consciousness by Anaesthetics: A Multiscale Modulation from the Molecular to the Systems Level / Cavaglià, M., Zizzi, E., Dombrowski, S., Deriu, M.A., Tuszynski, J.. - In: JOURNAL OF CONSCIOUSNESS STUDIES. - ISSN 1355-8250. - STAMPA. - 29:5-6(2022), pp. 21-49. [10.53765/20512201.29.5.021] | 1-gen-2022 | Cavaglià, MarcoZizzi, EricDeriu, Marco A.Tuszynski, Jacek + | Tuzsynski_JCS_Author_Proof.pdf; AnesthesiaConsciousness_V14.pdf |
| Alteration of lipid bilayer mechanics by volatile anesthetics: insights from μs-long molecular dynamics simulations / Zizzi, E.A., Cavaglia', M., Tuszynski, J.A., Deriu, M.A.. - In: ISCIENCE. - ISSN 2589-0042. - ELETTRONICO. - (2022). [10.1016/j.isci.2022.103946] | 1-gen-2022 | Eric A. ZizziMarco CavagliàJacek A. TuszynskiMarco A. Deriu | 1-s2.0-S2589004222002164-main.pdf; PIIS2589004222002164.pdf |
| In Silico Analysis of the Multi-Targeted Mode of Action of Ivermectin and Related Compounds / Aminpour, M., Cannariato, M., Preto, J., Ehsan Safaeeardebili, M., Moracchiato, A., Doria, D., Donato, F.D., Zizzi, E.A., Deriu, M.A., Scheim, D.E., Santin, A.D., Tuszynski, J.A.. - In: COMPUTATION. - ISSN 2079-3197. - ELETTRONICO. - 10:4(2022), p. 51. [10.3390/computation10040051] | 1-gen-2022 | Marco CannariatoAlexia MoracchiatoDomiziano DoriaFrancesca DonatoEric Adriano ZizziMarco Agostino DeriuJacek Adam Tuszynski + | computation-10-00051.pdf |
| Insights into the interaction dynamics between volatile anesthetics and tubulin through computational molecular modelling / Zizzi, E.A., Cavaglià, M., Tuszynski, J.A., Deriu, M.A.. - In: JOURNAL OF BIOMOLECULAR STRUCTURE AND DYNAMICS. - ISSN 1538-0254. - 40:16(2022), pp. 7324-7338. [10.1080/07391102.2021.1897044] | 1-gen-2022 | Eric A. ZizziMarco CavagliàJacek Adam TuszynskiMarco A. Deriu | Insights into the interaction dynamics between volatile anesthetics and tubulin through computationa.pdf; manuscript_accepted.pdf |
| A new method for protein characterization and classification using geometrical features for 3D face analysis: An example of tubulin structures / Di Grazia, L., Aminpour, M., Vezzetti, E., Rezania, V., Marcolin, F., Tuszynski, J.A.. - In: PROTEINS. - ISSN 0887-3585. - ELETTRONICO. - 89:1(2021), pp. 1-15. [10.1002/prot.25993] | 1-gen-2021 | Di Grazia L.Vezzetti E.Marcolin F.Tuszynski J. A. + | prot.25993.pdf; paper_proteins_AAM_2020 07 22.pdf |
| Computational study of potential galectin-3 inhibitors in the treatment of covid-19 / Aminpour, M., Cannariato, M., Zucco, A., Di Gregorio, E., Israel, S., Perioli, A., Tucci, D., Rossi, F., Pionato, S., Marino, S., Deriu, M.A., Velpula, K.K., Tuszynski, J.A.. - In: BIOMEDICINES. - ISSN 2227-9059. - 9:9(2021), p. 1208. [10.3390/biomedicines9091208] | 1-gen-2021 | Cannariato M.Zucco A.Di Gregorio E.Israel S.Tucci D.Rossi F.Pionato S.Deriu M. A.Tuszynski J. A. + | biomedicines-09-01208.pdf |
| Enhancing the activity of platinum-based drugs by improved inhibitors of ERCC1–XPF-mediated DNA repair / Ciniero, G., Elmenoufy, A.H., Gentile, F., Weinfeld, M., Deriu, M.A., West, F.G., Tuszynski, J.A., Dumontet, C., Cros-Perrial, E., Jordheim, L.P.. - In: CANCER CHEMOTHERAPY AND PHARMACOLOGY. - ISSN 0344-5704. - 87:2(2021), pp. 259-267. [10.1007/s00280-020-04213-x] | 1-gen-2021 | Deriu M. A.Tuszynski J. A. + | Ciniero2021_Article_EnhancingTheActivityOfPlatinum.pdf |
| JAK Inhibitors in Immune-Mediated Rheumatic Diseases: from a Molecular Perspective to Clinical Studies / Sperti, M., Malavolta, M., Ciniero, G., Borrelli, S., Cavaglià, M., Muscat, S., Tuszynski, J.A., Afeltra, A., Paolo Emanuele Margiotta, D., Navarini, L.. - In: JOURNAL OF MOLECULAR GRAPHICS & MODELLING. - ISSN 1093-3263. - 104:(2021), p. 107789. [10.1016/j.jmgm.2020.107789] | 1-gen-2021 | Michela SpertiMarta MalavoltaGloria CinieroSimone BorrelliMarco CavagliàJacek Adam Tuszynski + | 1-s2.0-S1093326320305787-main.pdf |
| In silico Investigations of the Mode of Action of Novel Colchicine Derivatives Targeting β-Tubulin Isotypes: A Search for a Selective and Specific β-III Tubulin Ligand / Pallante, L., Rocca, A., Klejborowska, G., Huczynski, A., Grasso, G., Tuszynski, J.A., Deriu, M.A.. - In: FRONTIERS IN CHEMISTRY. - ISSN 2296-2646. - 8:108(2020), pp. 1-8. [10.3389/fchem.2020.00108] | 1-gen-2020 | Pallante L.Tuszynski J. A.Deriu M. A. + | Pallante2020.pdf |
| Using the gibbs function as a measure of human brain development trends from fetal stage to advanced age / Rietman, E.A., Taylor, S., Siegelmann, H.T., Deriu, M.A., Cavaglia, M., Tuszynski, J.A.. - In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. - ISSN 1661-6596. - 21:3(2020), pp. 1-17. [10.3390/ijms21031116] | 1-gen-2020 | Deriu M. A.Cavaglia M.Tuszynski J. A. + | Using the Gibbs Function as a Measure of Human Brain Development Trends from Fetal Stage to Advanced Age.pdf |
| The role of structural polymorphism in driving the mechanical performance of the alzheimer's beta amyloid fibrils / Grasso, G., Rebella, M., Morbiducci, U., Tuszynski, J.A., Danani, A., Deriu, M.A.. - In: FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY. - ISSN 2296-4185. - 7:APR(2019), p. 83. [10.3389/fbioe.2019.00083] | 1-gen-2019 | Rebella M.Morbiducci U.Tuszynski J. A.Deriu M. A. + | The Role of Structural Polymorphism in Driving the Mechanical Performance of the Alzheimer's Beta Amyloid Fibrils.pdf |
| A novel interaction between the TLR7 and a colchicine derivative revealed through a computational and experimental study / Gentile, F., Deriu, M.A., Barakat, K.H., Danani, A., Tuszynski, J.A.. - In: PHARMACEUTICALS. - ISSN 1424-8247. - STAMPA. - 11:1(2018). [10.3390/ph11010022] | 1-gen-2018 | Francesco GentileMarco A. DeriuJacek A. Tuszynski + | - |
| Are there optical communication channels in the brain? / Zarkeshian, P., Kumar, S., Tuszynski, J.A., Barclay, P., Simon, C.. - In: FRONTIERS IN BIOSCIENCE. - ISSN 1093-9946. - STAMPA. - 23:8(2018), pp. 1407-1421. [10.2741/4652] | 1-gen-2018 | Jacek Tuszynski + | - |
| Comparative analyses and structural insights of the novel cytochrome P450 fusion protein family CYP5619 in Oomycetes / Denis Bamal, H., Chen, W., Sitheni Mashele, S., Nelson, D.R., Paul Kappo, A., Anthony Mosa, R., Yu, J., Tuszynski, J.A., Syed, K.. - In: SCIENTIFIC REPORTS. - ISSN 2045-2322. - STAMPA. - 8:1(2018). [10.1038/s41598-018-25044-0] | 1-gen-2018 | Jacek Tuszynski + | - |
| Computational Characterization of Small Molecules Binding to the Human XPF Active Site and Virtual Screening to Identify Potential New DNA Repair Inhibitors Targeting the ERCC1-XPF Endonuclease / Gentile, F., Barakat, K.H., Tuszynski, J.A.. - In: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. - ISSN 1661-6596. - 19:5(2018). [10.3390/ijms19051328] | 1-gen-2018 | GENTILE, FRANCESCOJacek Tuszynski + | - |