We undertake steps to overcome four challenges that have hindered the understanding of ZnO/biomolecule interfaces at the atomic scale: parametrization of a classical force field, ZnO surface termination and amino acid protonation state in methanol, and convergence of enhanced sampling molecular dynamics simulations. We predict adsorption free energies for histidine, serine, cysteine, and tryptophan in remarkable agreement with experimental measurements obtained via a novel indicator-displacement assay. Adsorption is driven by direct surface/amino-acid interactions mediated by terminal hydroxyl groups and stabilized by strongly structured methanol solvation shells.

Lessons from a Challenging System: Accurate Adsorption Free Energies at the Amino Acid/ZnO Interface / Michaelis, Monika; DELLE PIANE, Massimo; Rothenstein, Dirk; Perry, Carole C.; Colombi Ciacchi, Lucio. - In: JOURNAL OF CHEMICAL THEORY AND COMPUTATION. - ISSN 1549-9626. - ELETTRONICO. - 17:7(2021), pp. 4420-4434. [10.1021/acs.jctc.1c00165]

Lessons from a Challenging System: Accurate Adsorption Free Energies at the Amino Acid/ZnO Interface

Massimo Delle Piane;
2021

Abstract

We undertake steps to overcome four challenges that have hindered the understanding of ZnO/biomolecule interfaces at the atomic scale: parametrization of a classical force field, ZnO surface termination and amino acid protonation state in methanol, and convergence of enhanced sampling molecular dynamics simulations. We predict adsorption free energies for histidine, serine, cysteine, and tryptophan in remarkable agreement with experimental measurements obtained via a novel indicator-displacement assay. Adsorption is driven by direct surface/amino-acid interactions mediated by terminal hydroxyl groups and stabilized by strongly structured methanol solvation shells.
File in questo prodotto:
File Dimensione Formato  
manuscript.pdf

Open Access dal 01/07/2022

Descrizione: Articolo principale
Tipologia: 2. Post-print / Author's Accepted Manuscript
Licenza: PUBBLICO - Tutti i diritti riservati
Dimensione 8.58 MB
Formato Adobe PDF
8.58 MB Adobe PDF Visualizza/Apri
acs.jctc.1c00165.pdf

non disponibili

Tipologia: 2a Post-print versione editoriale / Version of Record
Licenza: Non Pubblico - Accesso privato/ristretto
Dimensione 5.84 MB
Formato Adobe PDF
5.84 MB Adobe PDF   Visualizza/Apri   Richiedi una copia
Pubblicazioni consigliate

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11583/2912852