Archivio Istituzionale della RicercaRE, ANGELA
RE, ANGELA
Dipartimento Scienza Applicata e Tecnologia
059734
Correlated fragile site expression allows the identification of candidate fragile genes involved in immunity and associated with carcinogenesis
2006 Re, A; Corà, D; Puliti, Am; Csaelle, M; Sbrana, I.
Graph theory analysis of genomic problems: community analysis of fragile sites correlations and of pseudogenes alignments
2008 Re, A; Molineris, I; Caselle, M.
Genome wide survey of MicroRNA-transcription factor feed-forward regulatory circuits in human
2009 Re, A; Corà, D; Taverna, D; Caselle, M
CircuitsDB: a database of mixed microRNA / Transcription Factor feed-forward regulatory circuits in human and mouse
2010 Olivier, Friard; Re, A; Daniela, Taverna; Michele De, Bortoli; Davide, Corà
Segmental chromosome aberrations converge on overexpression of mitotic spindle regulatory genes in high-risk neuroblastoma
2012 W. F., Ooi; Re, Angela; Sidarovich, Viktoryia; N., Arseni; Adami, Valentina; M., Giubettini; P., Scaruffi; S., Stigliani; P., Lavia; G. P., Tonini; Quattrone, Alessandro
Widespread uncoupling between transcriptome and translatome variations after a stimulus in mammalian cells
2012 T., Tebaldi; Re, A; G., Viero; I., Pegoretti; A., Passerini; E., Blanzieri; A., Quattrone
AURA: Atlas of UTR Regulatory Activity
2012 Dassi, Erik; Re, Angela; T., Mazza; Tebaldi, Toma; L., Caputi; Quattrone, Alessandro
RNA-protein interactions: an overview
2013 Re, A; Joshi, T; Kulberkyte, E; Morris, Q; Workman, Ct.
AURA 2: Empowering the discovery of post-transcriptional networks
2014 Dassi, Erik; Re, Angela; Leo, Sara; Tebaldi, Toma; Pasini, Luigi; Peroni, Daniele; Quattrone, Alessandro
Increased frequency of minimal homozygous deletions is associated with poor prognosis in primary malignant melanoma patients
2014 Boi, S.; Tebaldi, Toma; Re, Angela; Cantaloni, Chiara; Adami, Valentina; Barbareschi, M.; Cristofolini, Marco; Pasini, Luigi; Quattrone, Alessandro
Lineage-specific interface proteins match up the cell cycle and differentiation in embryo stem cells
2014 Re, A; Workman, Ct; Waldron, L; Quattrone, A
Public data and open source tools for multi-assay genomic investigation of disease
2015 Kannan, L; Ramos, M; Re, A; El-Hachem, N; Safikhani, Z; Gendoo, Dm; Davis, S; Gomez-Cabrero, D; Castelo, R; Hansen, Kd; Carey, Vj; Morgan, M; Culhane, Ac; Haibe-Kains, B; Waldron, L.
TrkA is amplified in malignant melanoma patients and induces an anti-proliferative response in cell lines.
2015 Pasini, L; Re, A; Tebaldi, T; Adami, V; Ricci, G; Quattrone, A
Molecular portraits: the evolution of the concept of transcriptome-based cancer signatures.
2015 Modelska, A; Quattrone, A; Re, A
Detecting modules in biological networks by edge weight clustering and entropy significance
2015 Lecca, Paola; Re, Angela
Detecting modules in biological networks by edge weights clustering and entropy significance
2016 Lecca, P; Re, A
TD-WGcluster (Time Dependent Weighted Graphs Clustering)
2016 Lecca, P; Re, A
Preface In : Lecca P, Re A editors. Computational Systems Biology – Inference and Modeling
2016 Lecca, P.; Re, A.; Ihekwaba, A. E.; Mura, I.; Nguyen, T.
Time series analysis of the Bacillus subtilis sporulation network reveals low dimensional chaotic dynamics
2016 Lecca, Paola; Mura, Ivan; Re, Angela; Barker, Gary C.; Ihekwaba, Adaoha E. C.
Computational Systems Biology – Inference and Modeling
2016 Lecca, P; Re, A; Ihekwaba, Ae; Mura, I; Nguyen, Tp.
| Citazione | Data di pubblicazione | Autori | File |
|---|---|---|---|
| Correlated fragile site expression allows the identification of candidate fragile genes involved in immunity and associated with carcinogenesis / Re, A; Corà, D; Puliti, Am; Csaelle, M; Sbrana, I.. - In: BMC BIOINFORMATICS. - ISSN 1471-2105. - ELETTRONICO. - 7:SEP(2006), p. 413. [10.1186/1471-2105-7-413] | 1-gen-2006 | Re A + | Correlated Fragile Site Expression Allows the Identification of Candidate Fragile genes Involved in Immunity and Associated with Carcinogenesis BMC Bioinformatics 2006.pdf |
| Graph theory analysis of genomic problems: community analysis of fragile sites correlations and of pseudogenes alignments / Re, A; Molineris, I; Caselle, M.. - In: COMPUTERS & MATHEMATICS WITH APPLICATIONS. - ISSN 0898-1221. - ELETTRONICO. - 55:5(2008), pp. 1034-1043. [10.1016/j.camwa.2006.12.100] | 1-gen-2008 | Re A + | Graph Theory Analysis of Genomics Problems Community Analysis of Fragile Sites Correlations and of Pseudogenes Alignments Computers and Mathematics with Applications 2008.pdf |
| Genome wide survey of MicroRNA-transcription factor feed-forward regulatory circuits in human / Re, A; Corà, D; Taverna, D; Caselle, M. - In: MOLECULAR BIOSYSTEMS. - ISSN 1742-2051. - ELETTRONICO. - 5:8(2009), pp. 854-867. [10.1039/b900177h] | 1-gen-2009 | Re A + | Genome-wide Survey of microRNA-Transcription Factor Feed-forward Regulatory Circuits in Human Mol BioSystems 2009.pdf |
| CircuitsDB: a database of mixed microRNA / Transcription Factor feed-forward regulatory circuits in human and mouse / Olivier, Friard; Re, A; Daniela, Taverna; Michele De, Bortoli; Davide, Corà. - In: BMC BIOINFORMATICS. - ISSN 1471-2105. - ELETTRONICO. - 11:AGO(2010), p. 435. [10.1186/1471-2105-11-435] | 1-gen-2010 | Re A + | CircuitsDB a Database of Mixed MicroRNA Transcription Factor Feed-forward Regulatory Circuits in Human and Mouse BMC Bioinformatics 2010.pdf |
| Segmental chromosome aberrations converge on overexpression of mitotic spindle regulatory genes in high-risk neuroblastoma / W. F., Ooi; Re, Angela; Sidarovich, Viktoryia; N., Arseni; Adami, Valentina; M., Giubettini; P., Scaruffi; S., Stigliani; P., Lavia; G. P., Tonini; Quattrone, Alessandro. - In: GENES, CHROMOSOMES & CANCER. - ISSN 1045-2257. - STAMPA. - 51:6(2012), pp. 545-556. [10.1002/gcc.21940] | 1-gen-2012 | Re, Angela + | Segmental Chromosome Aberrations Converge on Overexpression of Mitotic Spindle Regulatory Genes in High-risk Neuroblastoma Genes Chrom CAncer 2012.pdf |
| Widespread uncoupling between transcriptome and translatome variations after a stimulus in mammalian cells / T., Tebaldi; Re, A; G., Viero; I., Pegoretti; A., Passerini; E., Blanzieri; A., Quattrone. - In: BMC GENOMICS. - ISSN 1471-2164. - ELETTRONICO. - 13:SET(2012), p. 220. [10.1186/1471-2164-13-220] | 1-gen-2012 | Re A + | Widespread Uncoupling between Transcriptome and Translatome Variations after a Stimulus in Mammalian Cells BMC Genomics 2012.pdf |
| AURA: Atlas of UTR Regulatory Activity / Dassi, Erik; Re, Angela; T., Mazza; Tebaldi, Toma; L., Caputi; Quattrone, Alessandro. - In: BIOINFORMATICS. - ISSN 1367-4803. - STAMPA. - 28:1(2012), pp. 142-144. [10.1093/bioinformatics/btr608] | 1-gen-2012 | Re, Angela + | AURA Atlas of UTR Regulatory Activity Bioinformatics 2012.pdf |
| RNA-protein interactions: an overview / Re, A; Joshi, T; Kulberkyte, E; Morris, Q; Workman, Ct. (METHODS IN MOLECULAR BIOLOGY). - In: RNA Sequence, Structure, and Function: Computational and Bioinformatics MethodsELETTRONICO. - [s.l] : Springer, 2013. - ISBN 978-1-62703-708-2. - pp. 491-521 [10.1007/978-1-62703-709-9_23] | 1-gen-2013 | Re A + | RNA-Protein Interactions an Overview Methods Mol Biol 2014.pdf |
| AURA 2: Empowering the discovery of post-transcriptional networks / Dassi, Erik; Re, Angela; Leo, Sara; Tebaldi, Toma; Pasini, Luigi; Peroni, Daniele; Quattrone, Alessandro. - In: TRANSLATION. - ISSN 2169-0731. - ELETTRONICO. - 2014, Volume 2, Issue 1.:e27738(2014), pp. 1-6. [10.4161/trla.27738] | 1-gen-2014 | Re, Angela + | AURA 2.pdf |
| Increased frequency of minimal homozygous deletions is associated with poor prognosis in primary malignant melanoma patients / Boi, S.; Tebaldi, Toma; Re, Angela; Cantaloni, Chiara; Adami, Valentina; Barbareschi, M.; Cristofolini, Marco; Pasini, Luigi; Quattrone, Alessandro. - In: GENES, CHROMOSOMES & CANCER. - ISSN 1098-2264. - ELETTRONICO. - 53:6(2014), pp. 487-496. [10.1002/gcc.22160] | 1-gen-2014 | Re, Angela + | Boi Tebaldi GCC 2014.pdf |
| Lineage-specific interface proteins match up the cell cycle and differentiation in embryo stem cells / Re, A; Workman, Ct; Waldron, L; Quattrone, A. - In: STEM CELL RESEARCH. - ISSN 1873-5061. - ELETTRONICO. - 13:2(2014), pp. 316-328. [10.1016/j.scr.2014.07.008] | 1-gen-2014 | Re A + | Lineage-specific Interface Proteins Match up the Cell Cycle and Differentiation in Embryo Stem Cells Stem Cell Res 2014.pdf |
| Public data and open source tools for multi-assay genomic investigation of disease / Kannan, L; Ramos, M; Re, A; El-Hachem, N; Safikhani, Z; Gendoo, Dm; Davis, S; Gomez-Cabrero, D; Castelo, R; Hansen, Kd; Carey, Vj; Morgan, M; Culhane, Ac; Haibe-Kains, B; Waldron, L.. - In: BRIEFINGS IN BIOINFORMATICS. - ISSN 1477-4054. - ELETTRONICO. - 17:4(2015), pp. 603-615. [10.1093/bib/bbv080] | 1-gen-2015 | Re A + | Public Data and Open Source Tools for Multi-assay Genomic Investigation of Disease Brief. in Bioinform. 2016.pdf |
| TrkA is amplified in malignant melanoma patients and induces an anti-proliferative response in cell lines / Pasini, L; Re, A; Tebaldi, T; Adami, V; Ricci, G; Quattrone, A. - In: BMC CANCER. - ISSN 1471-2407. - ELETTRONICO. - 15:777(2015), pp. 77701-77718. [10.1186/s12885-015-1791-y] | 1-gen-2015 | Re A + | TrkA is Amplified in Malignant Melanoma Patients and Induces an Anti-proliferative Response in Cell Lines BMC Cancer 2015.pdf |
| Molecular portraits: the evolution of the concept of transcriptome-based cancer signatures / Modelska, A; Quattrone, A; Re, A. - In: BRIEFINGS IN BIOINFORMATICS. - ISSN 1477-4054. - ELETTRONICO. - 16:6(2015), pp. 1000-1007. [10.1093/bib/bbv013] | 1-gen-2015 | Re A + | Molecular Portraits The Evolution of the Concept of Transcriptome-bassed Cancer Signatures Brief. in Bioinform 2015.pdf |
| Detecting modules in biological networks by edge weight clustering and entropy significance / Lecca, Paola; Re, Angela. - In: FRONTIERS IN GENETICS. - ISSN 1664-8021. - ELETTRONICO. - 6:Aug(2015), p. 265. [10.3389/fgene.2015.00265] | 1-gen-2015 | Re, Angela + | Detecting Modules in Biological Networks by Edge Weight Clustering and Entropy Significance Front Genet 2015.pdf |
| Detecting modules in biological networks by edge weights clustering and entropy significance / Lecca, P; Re, A - In: Protein interaction networks in health and diseaseELETTRONICO. - Lausanne : Frontiers Media S. A., 2016. - ISBN 978-2-88919-982-2. - pp. 26501-26512 [10.3389/978-2-88919-982-2] | 1-gen-2016 | Re A + | Detecting Modules in Biological Networks by Edge Weight Clustering and Entropy Significance Front Genet 2015.pdf |
| TD-WGcluster (Time Dependent Weighted Graphs Clustering) / Lecca, P; Re, A. - ELETTRONICO. - (2016). | 1-gen-2016 | Re A + | - |
| Preface In : Lecca P, Re A editors. Computational Systems Biology – Inference and Modeling / Lecca, P.; Re, A.; Ihekwaba, A. E.; Mura, I.; Nguyen, T.. - STAMPA. - (2016), pp. 1-2. | 1-gen-2016 | Re A. + | - |
| Time series analysis of the Bacillus subtilis sporulation network reveals low dimensional chaotic dynamics / Lecca, Paola; Mura, Ivan; Re, Angela; Barker, Gary C.; Ihekwaba, Adaoha E. C.. - In: FRONTIERS IN MICROBIOLOGY. - ISSN 1664-302X. - ELETTRONICO. - 7:NOV(2016), pp. 1760-1777. [10.3389/fmicb.2016.01760] | 1-gen-2016 | Re, Angela + | Time Series Analysis of the Bacillus subtilis Sporulation Network Reveals Low Dimensional Chaotic Dynmaics Front Microbiol 2016.pdf |
| Computational Systems Biology – Inference and Modeling / Lecca, P; Re, A; Ihekwaba, Ae; Mura, I; Nguyen, Tp.. - STAMPA. - (2016). | 1-gen-2016 | Re A + | - |